Rv2477c - c.129T>C


Drug resistance types
14 Sensitive 18 RR-TB 65 HR-TB 30 MDR-TB 7 Pre-XDR-TB 3 XDR-TB 184 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 16
lineage3 5
La3 2
La3;lineage2.2.1 1
lineage6.1.3 1
lineage4.1.2.1 13
lineage4.9 75
La1.7;M.canetti;lineage4.9 3
lineage4.9;lineage6.3 7
M.canetti;lineage4.9 5
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.7 2
lineage2.2 5
La1.7;lineage4.9 6
21
lineage4.1.1.1 3
La3;lineage4.9 6
La1;lineage4.9 2
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.2 2
La1.2.BCG 1
lineage2.2.1 14
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8 9
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage4.1.1.3 3
lineage4.9.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage6.3 2
lineage4.3.4.2.1 2
lineage2.1 5
La1.6;La3;lineage4.9 2
lineage5.2 4
lineage4 3
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage2.2.1;lineage6.3 1
lineage4.1.3 2
lineage2.1;lineage4.9;lineage6.3 11
M.canetti;lineage1 1
lineage3.1.1 1
lineage4.6.2.2 5
lineage4.1;lineage4.8 1
lineage4.9;lineage7 4
lineage1.2.2.1;lineage4.4.1.1 1
lineage1.2.1.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage1.1.2 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8.1 1
lineage4.2;lineage4.9 1
lineage1.2.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage3.1.2.1;lineage4.9 1
La1.2 1
La3;lineage2.1;lineage4.9 3
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
lineage2.2.1;lineage3 1
lineage4.4.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.7.1;lineage4.9 1
La1.7 2
lineage4.3.4.1 2
La3;lineage2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
lineage4.6.3;lineage4.9 2
lineage2.1;lineage4.9;lineage7 1
lineage4.1.2.1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.2.2.2 1
lineage3.1 1
La1.7.1;La1.7.X-unk4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage1.1.3.2 1
lineage4.2.1 1
lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 321
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496523 Other lineage4.7 None
SRR5341456 Other lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR1184381 MDR-TB None
SRR28351341 Other lineage4.1.1.1 None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
SRR6789626 Other None
SRR25827682 Other None
SRR3675236 Other None
ERR4817060 Other None
SRR3675510 Sensitive La3;lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
ERR245758 Other lineage4.9.1 None
SRR26399973 Other La3;lineage4.9 None
ERR3275201 Sensitive lineage4.8 nl
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR926156 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6044942 HR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR9119499 MDR-TB lineage5.2 None
SRR3675214 Other lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
SRR1173706 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR6046593 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063849 HR-TB lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4799513 HR-TB lineage2.2 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR3675221 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR4798139 RR-TB lineage1.1.2 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR14782405 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR2229542 Other lineage4.8 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR12416840 MDR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786617 Other lineage4.1.1.1 None
ERR108125 RR-TB lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786843 Other None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR4816999 Other None
SRR1196768 MDR-TB None
SRR28119777 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR3675441 RR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
ERR2517514 Sensitive lineage4.8 None
SRR23961549 Other La1.2 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4872096 MDR-TB lineage4.6.2.2 None
SRR6046046 Other lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR1173355 Other lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR4816151 Other lineage4.8 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR6046305 Sensitive lineage4.9 None
ERR11466242 Sensitive lineage4.1.1.3 None
ERR11081864 Other lineage3 None
ERR990545 RR-TB lineage3 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045347 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR21690574 Other lineage4.1.2.1 None
SRR1172728 RR-TB La3 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR11049020 Other lineage4.8 None
SRR19295647 HR-TB lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675222 Other La1.7 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4872093 MDR-TB lineage5.2 None
ERR4815752 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
SRR7496509 Other None
ERR9786671 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR234659 HR-TB None
ERR2514692 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR21733183 RR-TB lineage1.1.2 None
ERR4800341 HR-TB lineage3 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675549 Other lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR6785413 Other lineage2.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675270 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR5535933 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR1173633 Other lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR2513470 Other lineage4.2.2.2 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR7821123 Other lineage1.1.3.2 None
SRR6785268 Sensitive lineage4.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR11972306 Pre-XDR-TB lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR176751 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR3797047 MDR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR9119502 MDR-TB lineage4.6.2.2 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR4769452 Other lineage4.9 None