Rv0668 - c.484_486delGTCinsAT
Drug resistance types
1 Sensitive
2 RR-TB
10 HR-TB
5 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 3 |
| lineage4.1;lineage4.8 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 2 |
| 4 | |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage5.2 | 2 |
| lineage1.2.2.2 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 34 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045526 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786843 | Other | None | ERR212001 | HR-TB | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None |
|---|
