TB-Profiler
Home
Upload
SRA data
Rv0668
- c.3564A>G
Drug resistance types
52 Sensitive
27 RR-TB
107 HR-TB
76 MDR-TB
9 Pre-XDR-TB
4 XDR-TB
252 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
106
lineage2.2.1
27
M.canetti;lineage2.1;lineage4.9
26
25
lineage4.1.2.1
22
lineage2.1;lineage4.9
20
lineage4.8
14
lineage3
13
La3;M.canetti;lineage2.1;lineage4.9
12
lineage2.1;lineage4.9;lineage6.3
9
Showing 1 to 10 of 149 entries
Previous
1
2
3
4
5
…
15
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
527
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR038268
HR-TB
La3;M.canetti;lineage4.8;lineage4.9
None
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1023295
MDR-TB
M.canetti;lineage2.1;lineage4.1.2.1
None
ERR1023509
Other
lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035157
Other
lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR11138607
Pre-XDR-TB
lineage2.2.1
None
Showing 1 to 10 of 527 entries
Previous
1
2
3
4
5
…
53
Next