Rv3596c - c.1512C>G
Drug resistance types
12 Sensitive
1 RR-TB
27 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 31 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| 1 | |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.4.1.2 | 1 |
| lineage3 | 2 |
| lineage6.1.1 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.4 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29096150 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR987722 | MDR-TB | None | ERR176778 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR926164 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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