Rv2245 - c.564C>T


Drug resistance types
87 Sensitive 5 RR-TB 126 HR-TB 65 MDR-TB 28 Pre-XDR-TB 0 XDR-TB 130 Other
lineage Counts
lineage Count
148
lineage4.3.4.1 2
lineage4.6.1.1 1
lineage4 46
lineage2.2.1 122
lineage2.2 10
lineage1.1.3.1 1
lineage5.2 2
lineage4.3.2 1
lineage4.6.2.2 3
lineage4.1 2
lineage4.1.2.1 13
lineage4.8;lineage4.1 2
lineage4.8 5
lineage4.1.1 2
lineage4.1.3 2
lineage4.3.4.1;lineage4.3.3 1
lineage6 1
lineage6.1.1 2
lineage6.3.1 1
lineage3 5
lineage3.1.2.2;lineage3.1.2.1 1
lineage4.4.1.1 1
La3 1
lineage2.2.1.2 1
lineage4.3.3 4
lineage4.9 22
lineage2.2.1.1 2
lineage3.1 2
lineage2 3
lineage1.2.1.2 1
lineage1.1.2 2
La1.8.1 3
lineage4.5 1
lineage7;lineage2.2.1.2 1
lineage4.1.1.3 2
lineage4.9;La3 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.3.4.2.1 3
lineage1.2.1.1 1
lineage2.1 2
lineage4.4.1 1
lineage4.3 1
lineage4.8;La3 2
lineage4.1;lineage1 1
lineage4.1.2 2
lineage4.9;lineage3.1.2.1 1
lineage4.9;lineage2.1 1
La2 1
lineage4.3.2.1 1
La1.3 1
lineage1.2.2.2 1
lineage3.1.2 1
spoligotype Counts
spoligotype Count
None 441
Geographic prevalence
Country level data for this variant is available for 46 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4812289 MDR-TB lineage4.3.4.1 None
ERR6866410 Sensitive None
ERR5336148 Other None
ERR6358991 HR-TB None
ERR6866022 Other None
ERR6358755 Other lineage4.6.1.1 None
ERR6359045 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR6866639 Other None
ERR702404 HR-TB None
SRR11662349 MDR-TB lineage2.2.1 None
ERR702406 HR-TB None
ERR736834 Sensitive lineage4 None
ERR736865 HR-TB None
ERR736839 Other None
ERR736874 HR-TB None
ERR736872 Sensitive lineage4 None
ERR736867 HR-TB None
SRR11662566 MDR-TB lineage2.2.1 None
ERR751326 Sensitive lineage4 None
SRR11662674 MDR-TB lineage2.2.1 None
SRR11662673 MDR-TB lineage2.2.1 None
SRR22249903 Sensitive lineage2.2.1 None
SRR5217427 RR-TB lineage2.2.1 None
SRR11662678 MDR-TB lineage2.2.1 None
SRR5217431 RR-TB lineage2.2.1 None
SRR11662634 MDR-TB lineage2.2.1 None
SRR11662331 MDR-TB lineage2.2.1 None
SRR11662408 Pre-XDR-TB lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
SRR11662327 Pre-XDR-TB lineage2.2.1 None
SRR22249992 Sensitive lineage2.2.1 None
SRR22249977 Sensitive lineage2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR11662695 MDR-TB lineage2.2.1 None
SRR11662688 MDR-TB lineage2.2.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR11662551 MDR-TB lineage2.2.1 None
SRR11662363 MDR-TB lineage2.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR9117709 HR-TB None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786440 Other lineage4.1 None
ERR9125780 Sensitive lineage2.2.1 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786569 Other lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786508 Sensitive lineage4.3.4.1;lineage4.3.3 None
ERR9786604 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9787165 Other lineage6 None
ERR9787014 Other lineage6.1.1 None
ERR9787139 Other lineage6.3.1 None
ERR990545 Other lineage3 None
ERR9896144 Other lineage3 None
ERR9787197 Other None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR11662159 MDR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1158918 Sensitive lineage4 None
ERR11050318 Sensitive lineage2.2.1 None
SRR1172728 MDR-TB None
SRR1172310 HR-TB None
SRR1169194 Other None
SRR1169249 Other La3 None
SRR1169306 Other None
SRR1172234 Other None
SRR1172951 Other None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173153 HR-TB None
SRR1173118 Other None
SRR1173400 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173384 Other lineage4 None
SRR1173562 HR-TB lineage4 None
SRR1173484 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173778 Other None
SRR1173629 Other None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1175074 MDR-TB None
SRR1174897 HR-TB None
SRR1180137 Other lineage2.2.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180172 Other lineage2.2.1 None
SRR1180996 HR-TB lineage4 None
SRR1181020 Other lineage2.2.1 None
SRR1183965 Sensitive lineage4.9 None
SRR1184294 HR-TB None
SRR1181289 Other lineage2.2.1 None
SRR1183049 Other lineage2.2 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR11662178 MDR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR1184388 Other None
SRR11662129 Pre-XDR-TB lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196566 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR12142370 MDR-TB lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR1196768 MDR-TB None
SRR12142339 HR-TB lineage2.2.1 None
SRR12142341 HR-TB None
SRR12199425 Sensitive lineage2.2.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR14801749 Sensitive None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR14519814 Sensitive lineage2.2.1 None
SRR16058526 Sensitive lineage2.2.1 None
SRR15368973 Other None
SRR25827687 MDR-TB lineage1.1.2 None
SRR11662216 MDR-TB lineage2.2.1 None
SRR17658565 Other lineage3 None
SRR11662720 Pre-XDR-TB lineage2.2.1 None
SRR11662519 MDR-TB lineage2.2.1 None
SRR1791747 Other La1.8.1 None
SRR18213713 HR-TB lineage4.5 None
SRR11662589 MDR-TB lineage2.2.1 None
SRR11662570 Pre-XDR-TB lineage2.2.1 None
SRR11662573 MDR-TB lineage2.2.1 None
SRR11662382 MDR-TB lineage2.2.1 None
SRR11662505 MDR-TB lineage2.2.1 None
SRR11662383 MDR-TB lineage2.2.1 None
SRR11662380 MDR-TB lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
SRR20969669 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR25827682 Other None
SRR20970016 Other lineage2.2 None
ERR11082239 Sensitive lineage2.2.1 None
ERR11081258 Other lineage4.8 None
ERR11081463 Sensitive lineage2.2.1 None
SRR26399808 HR-TB lineage2.2.1 None
SRR24083631 Sensitive lineage2.2.1 None
SRR21732385 Sensitive lineage2.2.1 None
ERR11083045 Sensitive lineage2.2.1 None
SRR10828206 Pre-XDR-TB lineage2.2.1 None
SRR26399239 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR26399973 Other lineage4.9;La3 None
SRR26159043 Other lineage4.9 None
ERR4815604 HR-TB None
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675488 HR-TB None
SRR3205964 Pre-XDR-TB lineage2.2.1 None
SRR3205962 Pre-XDR-TB lineage2.2.1 None
SRR3205963 Pre-XDR-TB lineage2.2.1 None
SRR3675222 Other None
SRR3675221 HR-TB None
SRR5709870 Pre-XDR-TB lineage2.2.1 th
ERR4814734 Other lineage1.2.1.1 None
SRR3675234 Other None
SRR5709778 Sensitive lineage2.2.1 th
SRR3675236 HR-TB None
ERR702405 Sensitive lineage2.1 None
SRR5709823 Pre-XDR-TB lineage2.2.1 th
ERR1750938 Other lineage4.4.1 None
SRR5709865 Pre-XDR-TB lineage2.2.1 th
SRR3675232 Other lineage4.1.2.1 None
SRR3675246 Sensitive lineage4 None
SRR5709989 MDR-TB lineage2.2.1 th
SRR5709876 MDR-TB lineage2.2.1 th
SRR5709961 MDR-TB lineage2.2.1 th
SRR5709813 MDR-TB lineage2.2.1 th
SRR5709923 MDR-TB lineage2.2.1 th
SRR5709881 MDR-TB lineage2.2.1 th
SRR5709921 MDR-TB lineage2.2.1 th
SRR5709763 Pre-XDR-TB lineage2.2.1 th
SRR5709928 Pre-XDR-TB lineage2.2.1 th
SRR5709933 Pre-XDR-TB lineage2.2.1 th
SRR5709828 Sensitive lineage2.2.1 th
SRR5709864 Pre-XDR-TB lineage2.2.1 th
ERR176751 HR-TB None
SRR5709902 Pre-XDR-TB lineage2.2.1 th
SRR5709903 Pre-XDR-TB lineage2.2.1 th
ERR176568 Other lineage4.3 None
ERR176643 HR-TB None
SRR3675311 Other None
ERR176740 HR-TB None
SRR3675501 HR-TB None
SRR5710026 Pre-XDR-TB lineage2.2.1 th
SRR5709863 Pre-XDR-TB lineage2.2.1 th
ERR4813337 MDR-TB lineage4.3.3 None
SRR8237375 Sensitive lineage2.2.1 ch
SRR3675312 HR-TB lineage4 None
SRR3675510 Other None
ERR2027263 Other lineage4 None
ERR4816999 Other None
ERR212001 HR-TB None
ERR212033 HR-TB None
SRR3675574 HR-TB None
SRR3675572 Other None
ERR212138 HR-TB lineage4 None
ERR212121 HR-TB None
ERR4816466 HR-TB None
SRR3675571 HR-TB None
SRR3742665 HR-TB None
SRR5341384 Sensitive lineage4.9 None
ERR4816656 HR-TB None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR4817893 Other lineage4.8;La3 None
ERR11051002 Sensitive lineage2.2.1 None
ERR775793 Sensitive lineage2.2.1 th
ERR751705 Sensitive lineage2.2.1 th
ERR718505 Sensitive lineage2.2.1 th
ERR718541 MDR-TB lineage2.2.1 th
ERR718379 Sensitive lineage2.2.1 th
ERR4819068 Sensitive lineage4.1;lineage1 None
ERR4817896 HR-TB lineage2.2.1 None
SRR7496472 Other None
ERR846997 MDR-TB lineage2.2.1 th
ERR4818021 Other La1.8.1 None
ERR751740 MDR-TB lineage2.2.1 th
ERR751888 HR-TB lineage2.2.1 th
SRR5074175 Sensitive lineage2.2.1 vn
ERR751992 Sensitive lineage2.2.1 th
ERR752245 Sensitive lineage2.2.1 th
ERR234659 HR-TB None
ERR751926 Sensitive lineage2.2.1 th
ERR4818347 Other lineage4.1.2 None
ERR718504 MDR-TB lineage2.2.1 th
ERR751785 Sensitive lineage2.2.1 th
SRR5341366 Sensitive lineage4 None
ERR4818929 HR-TB None
ERR751741 Sensitive lineage2.2.1 th
SRR5341453 Sensitive None
ERR4818607 Sensitive lineage4.9 None
ERR751815 HR-TB lineage2.2.1 th
ERR751855 Sensitive lineage2.2.1 th
ERR751715 Sensitive lineage2.2.1 th
ERR4820854 Other lineage4.1.2.1 None
SRR5341387 Other lineage4 None
SRR5341425 Other lineage4 None
ERR752045 HR-TB lineage2.2.1 th
ERR752156 MDR-TB lineage2.2.1 th
ERR751893 Sensitive lineage2.2.1 th
ERR752141 HR-TB lineage2.2.1 th
ERR2514327 HR-TB lineage4.8 None
ERR752167 HR-TB lineage2.2.1 th
SRR5217404 Sensitive lineage2.2.1 None
ERR1035138 MDR-TB None
ERR2514390 Sensitive lineage4.9;lineage3.1.2.1 None
SRR5341302 HR-TB None
SRR5341455 Sensitive lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341299 Sensitive lineage4 None
ERR2514692 Other None
SRR5341330 HR-TB None
SRR5341308 Sensitive lineage4 None
SRR5341333 HR-TB None
ERR502511 Sensitive lineage4.9;lineage2.1 None
SRR5341469 Other lineage4 None
ERR2693231 Other None
SRR5341470 HR-TB None
SRR5431730 Other La1.8.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5535933 HR-TB None
ERR2693257 Other None
SRR6045526 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
SRR6045503 HR-TB None
SRR6045555 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6046152 Other lineage4.9 None
SRR6046066 HR-TB None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6044890 Other lineage4.9 None
SRR6045327 HR-TB None
SRR6046133 HR-TB None
SRR6045892 Sensitive None
SRR6044838 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6045233 HR-TB None
ERR2516459 MDR-TB lineage2.2.1 nl
SRR6045399 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6046594 HR-TB lineage4 None
SRR6046397 Other None
SRR6046492 Other None
SRR6046540 HR-TB None
ERR4830353 Other None
ERR11466146 Other lineage4.3.4.2.1 None
SRR6511621 HR-TB None
ERR502510 Sensitive lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831618 MDR-TB lineage2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831546 HR-TB lineage2.2 None
SRR9970980 Other lineage4.1.2 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR11465665 Other lineage4.1.1.3 None
ERR502524 HR-TB La2 None
ERR502532 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR8217918 HR-TB None
SRR6789626 Other None
ERR294266 HR-TB None
SRR7496509 Other None
SRR7535082 Sensitive lineage4 None
SRR9971112 Other lineage2.2.1 None
SRR7535086 Other None
SRR7585435 Other lineage4.9 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323066 Sensitive lineage4 None
ERR323039 HR-TB None
ERR323043 HR-TB None
ERR323053 HR-TB None
ERR11489020 MDR-TB lineage2.2.1 None
ERR323085 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR1034634 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063857 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063839 HR-TB lineage2.2 None
ERR1063896 Sensitive None
ERR1063862 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR108471 HR-TB lineage4 None
ERR11044041 Sensitive lineage2.2.1 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR11044149 Sensitive lineage2.2.1 None
ERR3273109 MDR-TB lineage4 None
ERR11044406 Sensitive lineage2.2.1 None
ERR11044405 Sensitive lineage2.2.1 None
ERR11049020 Other lineage4.8 None
ERR133825 Sensitive lineage4 None
ERR137286 Sensitive lineage4 None
ERR3283013 MDR-TB lineage4 None
ERR3283008 Other lineage4.9 None
ERR3273187 MDR-TB lineage2.2.1 None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283032 HR-TB None
ERR3283027 HR-TB None
ERR3283024 Other None
ERR3283043 Other lineage4.9 None
ERR3283031 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3797014 Other None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3797036 HR-TB None
ERR3797017 Other None
ERR3797069 Other None
ERR3797044 Other None
ERR3797048 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797079 Sensitive lineage4 None
ERR3797063 HR-TB None
ERR3797081 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3804155 Other lineage4.1.2.1 None
ERR3797087 Sensitive lineage4 None
ERR3799304 Other lineage6.1.1 None
ERR4407463 HR-TB None
ERR3804169 HR-TB lineage4.1.3 None
ERR4024991 Other None
ERR4769474 HR-TB lineage4 None
ERR4407506 RR-TB lineage2.2.1 None
ERR4769457 Other lineage4.9 None
ERR4769521 HR-TB None
ERR4769506 Sensitive La1.3 None
ERR4797264 Sensitive None
ERR4797184 Sensitive lineage4 None
ERR4797201 Other lineage1.2.2.2 None
ERR4796254 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798099 Other None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 Other lineage3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR12015083 Other lineage4.8;La3 None
ERR4828542 Sensitive lineage2.2.1 vn
ERR4797474 Other None
ERR4797588 MDR-TB lineage3 None
ERR4798139 Sensitive lineage1.1.2 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4799378 Sensitive lineage4 None
ERR4810624 HR-TB lineage2.2 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None