Rv2245 - c.564C>T
Drug resistance types
26 Sensitive
0 RR-TB
11 HR-TB
17 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 47 |
| lineage4.9 | 3 |
| lineage2.2 | 4 |
| 11 | |
| lineage3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.9;lineage2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| M.caprae;M.bovis | 1 |
| lineage2.1 | 1 |
| M.orygis | 1 |
| La1.2 BCG | 1 |
| lineage1.1 | 1 |
| lineage4.8.2;lineage2.2.1 | 1 |
| La1.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 81 |
Geographic prevalence
Country level data for this variant is available for 47 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5709876 | MDR-TB | lineage2.2.1 | th | ERR502532 | Other | lineage4.9 | None | ERR752141 | HR-TB | lineage2.2.1 | th | SRR5709923 | MDR-TB | lineage2.2.1 | th | ERR4819781 | Other | lineage2.2 | None | ERR751926 | Sensitive | lineage2.2.1 | th | ERR702404 | HR-TB | None | ERR751715 | Sensitive | lineage2.2.1 | th | SRR5709865 | Pre-XDR-TB | lineage2.2.1 | th | ERR2514535 | Sensitive | lineage3 | gb | SRR5709961 | MDR-TB | lineage2.2.1 | th | ERR1035138 | MDR-TB | None | ERR4812289 | MDR-TB | lineage4.3.4.1 | None | ERR752167 | HR-TB | lineage2.2.1 | th | ERR6358991 | HR-TB | None | ERR502510 | Sensitive | lineage4.9;lineage2.1 | None | ERR752045 | HR-TB | lineage2.2.1 | th | ERR751888 | HR-TB | lineage2.2.1 | th | SRR5709902 | Pre-XDR-TB | lineage2.2.1 | th | SRR5074175 | Sensitive | lineage2.2.1 | vn | SRR7496509 | Other | None | ERR751705 | Sensitive | lineage2.2.1 | th | SRR5709881 | MDR-TB | lineage2.2.1 | th | SRR5710026 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709813 | MDR-TB | lineage2.2.1 | th | ERR4816585 | Other | lineage2.2 | None | ERR751893 | Sensitive | lineage2.2.1 | th | ERR4828542 | Sensitive | lineage2.2.1 | vn | SRR5709870 | Pre-XDR-TB | lineage2.2.1 | th | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR718505 | Sensitive | lineage2.2.1 | th | ERR718504 | MDR-TB | lineage2.2.1 | th | SRR8237375 | Sensitive | lineage2.2.1 | ch | ERR2516459 | MDR-TB | lineage2.2.1 | nl | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | SRR5709989 | MDR-TB | lineage2.2.1 | th | SRR5341330 | Other | M.caprae;M.bovis | None | ERR846997 | MDR-TB | lineage2.2.1 | th | ERR702405 | Sensitive | lineage2.1 | None | ERR752245 | Sensitive | lineage2.2.1 | th | SRR3675572 | Other | None | SRR5709928 | Pre-XDR-TB | lineage2.2.1 | th | SRR5341341 | Pre-XDR-TB | lineage2.2 | None | ERR751741 | Sensitive | lineage2.2.1 | th | ERR718379 | Sensitive | lineage2.2.1 | th | ERR702406 | Other | lineage4.9 | None | ERR2514692 | Other | M.orygis | None | ERR775793 | Sensitive | lineage2.2.1 | th | SRR5709828 | Sensitive | lineage2.2.1 | th | SRR5709903 | Pre-XDR-TB | lineage2.2.1 | th | ERR6359045 | Other | None | ERR751740 | MDR-TB | lineage2.2.1 | th | ERR751785 | Sensitive | lineage2.2.1 | th | ERR6358755 | Other | La1.2 BCG | None | ERR4815604 | Other | lineage1.1 | None | SRR5709778 | Sensitive | lineage2.2.1 | th | SRR5341333 | Other | None | ERR751815 | HR-TB | lineage2.2.1 | th | SRR5341384 | Sensitive | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | SRR5709763 | Pre-XDR-TB | lineage2.2.1 | th | ERR751992 | Sensitive | lineage2.2.1 | th | SRR5709921 | MDR-TB | lineage2.2.1 | th | ERR751855 | Sensitive | lineage2.2.1 | th | SRR5709864 | MDR-TB | lineage2.2.1 | th | SRR7496472 | Other | None | ERR1035122 | Sensitive | lineage4.8.2;lineage2.2.1 | None | ERR502524 | HR-TB | None | ERR752156 | MDR-TB | lineage2.2.1 | th | SRR5709863 | Pre-XDR-TB | lineage2.2.1 | th | ERR718541 | MDR-TB | lineage2.2.1 | th | ERR1023525 | HR-TB | La1.7 | None | SRR5709933 | Pre-XDR-TB | lineage2.2.1 | th | SRR5341453 | Sensitive | None | ERR4814352 | HR-TB | None | SRR5709823 | Pre-XDR-TB | lineage2.2.1 | th |
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