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SRA data
Rv3246c
- c.558G>T
Drug resistance types
94 Sensitive
10 RR-TB
57 HR-TB
28 MDR-TB
4 Pre-XDR-TB
3 XDR-TB
186 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
132
25
lineage2.1;lineage4.9
16
lineage2.2.1
16
lineage4.1.2.1
11
lineage2.1;lineage4.9;lineage6.3
10
lineage4.9;lineage6.3
9
lineage4
8
La3;lineage4.9
6
lineage2.1
5
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
382
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11049020
Other
lineage4.8
None
ERR11252736
Other
lineage4.9
None
ERR11465509
Sensitive
lineage4.3.4.2.1
None
ERR11465510
Sensitive
lineage4.3.4.2.1
None
ERR13265528
Other
lineage4.9;lineage6.3
None
ERR13265748
Other
lineage4.9;lineage6.3
None
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