Rv1173 - c.1740G>C
Drug resistance types
35 Sensitive
3 RR-TB
56 HR-TB
15 MDR-TB
2 Pre-XDR-TB
3 XDR-TB
127 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.9 | 89 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1 | 13 |
| 15 | |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 10 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.1.2.1 | 6 |
| M.canetti;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 6 |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.2.BCG | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| M.canetti;lineage2.2 | 2 |
| La1.8.1 | 2 |
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage5.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage1.2.1.2 | 1 |
| lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage6.3.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| La1.2;La1.8.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.1.2 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 241 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786569 | Other | lineage4.8 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR29016780 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR18213713 | HR-TB | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR751326 | Other | lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4800341 | Other | lineage3 | None | SRR3675387 | Other | lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1184294 | Other | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR9786843 | Other | None | ERR2514692 | Other | None | SRR25827682 | Other | None | SRR28351339 | MDR-TB | lineage4 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR9786604 | Other | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4796254 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR4407463 | HR-TB | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR1063896 | Sensitive | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341425 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6045526 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR26159043 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR3675248 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | SRR3675236 | Other | None | ERR3283044 | Other | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR9117709 | Other | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR9786671 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | ERR6866807 | Other | lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045832 | Other | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3675522 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1159378 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496517 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR29051077 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6789626 | Other | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR7496509 | Other | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7496472 | Other | lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR28119752 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR2514390 | Sensitive | lineage3.1.2.1;lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None |
|---|
