EBG00000313339 - n.397T>C
Drug resistance types
113 Sensitive
5 RR-TB
94 HR-TB
20 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 2 |
| 78 | |
| lineage4.8;lineage4.1 | 2 |
| lineage4.6.4 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.7 | 1 |
| lineage2.2.1 | 25 |
| lineage4.4.1.1 | 3 |
| lineage4.8 | 2 |
| lineage4.1.2.1 | 17 |
| lineage2.2.2 | 3 |
| lineage3 | 7 |
| lineage2 | 2 |
| lineage4 | 74 |
| La3 | 1 |
| lineage4.9 | 35 |
| lineage2.2 | 5 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 3 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.8.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3 | 1 |
| lineage4.1.1 | 2 |
| lineage4;lineage1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.2 | 3 |
| lineage1.1.2 | 4 |
| lineage4.3.2.1 | 2 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La1.6 | 1 |
| La1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 307 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9119096 | Other | lineage4.3.3 | None | ERR8976043 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR9119230 | HR-TB | lineage2.2.1 | None | ERR9285908 | Sensitive | lineage4.4.1.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR069978 | Pre-XDR-TB | lineage2.2.2 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173777 | Other | lineage4 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416824 | HR-TB | None | SRR11972306 | Pre-XDR-TB | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861322 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837677 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18911980 | Sensitive | lineage2.2.2 | None | SRR19324818 | Sensitive | lineage1.1.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR26399464 | HR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR212033 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816656 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR234659 | HR-TB | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5073736 | HR-TB | lineage2.2.1 | vn | SRR5341453 | Sensitive | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341368 | MDR-TB | lineage1.1.2 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341387 | Other | lineage4 | None | ERR4819660 | Sensitive | None | SRR5341456 | Other | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341333 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341469 | Other | lineage4 | None | ERR2517475 | Other | lineage4 | None | ERR4821053 | Other | lineage3 | None | ERR278594 | HR-TB | None | ERR2660466 | Sensitive | lineage1.1.2 | None | ERR2660479 | Sensitive | lineage1.1.2 | None | SRR6046133 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045892 | Sensitive | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045952 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4831117 | HR-TB | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR4831638 | Sensitive | None | SRR7535082 | Sensitive | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR323107 | Other | lineage4 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR11268039 | Other | La1.6 | None | ERR323066 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR3283057 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283017 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR3468544 | HR-TB | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797036 | HR-TB | None | ERR369651 | HR-TB | lineage4.6.2.2 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR3797083 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4024991 | Other | None | ERR4188350 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797474 | Other | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4800341 | Other | lineage3 | None | ERR4830342 | HR-TB | lineage2.2.1 | vn | ERR4799378 | Sensitive | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR702404 | HR-TB | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR752229 | Other | lineage4.5 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR7821132 | Sensitive | lineage1.2.2.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None |
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