Rv3457c - c.336G>C


Drug resistance types
12 Sensitive 7 RR-TB 27 HR-TB 17 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 119 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 12
lineage4.9 31
lineage4.1.2 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.9;lineage6.3 7
lineage4.1.2.1 12
lineage4 3
La1.2.BCG;La1.8.1 1
lineage4.8 3
lineage2.2.1 8
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage6.3 2
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La3;lineage2.1;lineage4.9;lineage6.3 3
14
M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 8
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La3;lineage4.9 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.1 3
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.3 2
lineage4.3.2.1 1
La3;lineage2.2.1 2
lineage3 3
lineage6.1.2 1
lineage2.2.1.1 2
lineage2.2.2;lineage4 1
lineage2.1 3
lineage4.6.4;lineage4.9 1
La1.8.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
lineage6.3.1 1
La2;lineage2.2 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.1 1
lineage2.2.2 1
lineage2.2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.2 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage1.1.3.1 1
La3 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage4.4.1.1 1
lineage4.6.2.2 1
lineage3.1.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage6.1.3 1
lineage1.1.1 2
La1.7;lineage4.9;lineage6 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage1.1.2 1
La2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.3.4.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.4.2 1
La1.7;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.1 1
spoligotype Counts
spoligotype Count
None 184
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675457 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR4798823 HR-TB lineage4 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1175052 HR-TB lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786569 Other lineage4.8 None
SAMN02585910 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR13285068 Sensitive lineage4.9 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
SRR29016901 Other La3;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR9117709 Other None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4407452 Other lineage3 None
ERR9787030 RR-TB lineage6.1.2 None
SRR1180147 Other lineage2.2.1.1 None
SRR7496472 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9787197 Other None
ERR234659 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR4819462 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045359 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR18003019 Other lineage2.2.1 None
ERR9786627 Other lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4814734 Other lineage1.2.1.1 None
SRR6045526 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4821655 HR-TB lineage4.9 None
ERR4816999 Other None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR6359069 Sensitive lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9117805 Other lineage4.3.2 None
ERR4797201 Other lineage1.2.2.2 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR1172817 Other La3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR779852 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6045892 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR6832787 Sensitive lineage2.2.1 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR3470647 Other lineage3 None
ERR9786604 Other None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4819314 Other lineage1.1.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR29016780 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR20969677 HR-TB La3;lineage2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817667 HR-TB lineage4.8 None
ERR6866410 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675446 RR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4815604 Other None
SRR6789626 Other None
ERR9786617 Other lineage4.1.1.1 None
ERR9786515 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR3675236 Other None
SRR1165699 Other lineage4.9 None
ERR4800341 Other lineage3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
ERR1023509 Other lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR7496509 Other None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR23961559 Other La1.7;lineage4.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786440 Other lineage4.1 None