Rv3457c - c.336G>C


Drug resistance types
16 Sensitive 3 RR-TB 78 HR-TB 15 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 90 Other
lineage Counts
lineage Count
88
La1.8.1 2
lineage4.9 22
lineage4 13
lineage4.3.3 2
lineage2.2.1 11
lineage2.2.1.1 2
lineage3.1 2
lineage2 3
lineage4.1.1.3 1
lineage4.3.4.1 1
lineage4.5 1
lineage2.2 3
lineage4.2;La1.7 1
lineage2.2.1;La3 1
lineage4.1.1.1 1
lineage6.3;lineage2.2.1 1
lineage4.1.1 2
lineage1.2.1.1 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage4.1.2.1 13
lineage4.8 3
lineage4.4.1.1 1
lineage3.1.3 1
lineage4.1.2 1
lineage1.1.1 2
lineage4;lineage1.1 1
lineage4.1 2
lineage2.1 1
lineage4.2.1.1 1
La2 1
lineage4.7 1
lineage3 3
lineage4.1.3 2
La1.3 2
lineage4.9;La1.3 1
lineage1.2.2.2 1
lineage4.6.1.1 1
lineage1.1.3.1 1
lineage4.3.2 1
lineage4.3.2.1 1
lineage1.1.2 1
lineage4.3.4.2 1
lineage6 2
lineage4.6.2.2 1
lineage6.3.1 1
spoligotype Counts
spoligotype Count
None 206
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1169194 Other None
SRR11462861 Other La1.8.1 None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1172885 HR-TB lineage4.9 None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1172951 Other None
SRR1173118 Other None
SRR1173153 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173363 HR-TB None
SRR1173629 Other None
SRR1173384 Other lineage4 None
SRR1173400 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173788 Other None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1175049 RR-TB None
SRR1175052 HR-TB lineage4.9 None
SRR1175074 MDR-TB None
SRR1184312 HR-TB lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1180270 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1184380 HR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1196546 HR-TB None
SRR1196494 MDR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196566 HR-TB None
SRR12142341 HR-TB None
SRR1196768 MDR-TB None
SRR12416824 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR15368973 Other None
SRR13591342 HR-TB lineage4.1.1.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18003019 Other lineage2.2.1 None
SRR18910194 HR-TB lineage2.2 None
SRR23961559 Other lineage4.2;La1.7 None
SRR22424787 Sensitive lineage4.9 None
SRR26937071 MDR-TB lineage2.2.1;La3 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR20969677 HR-TB lineage2 None
ERR4815604 HR-TB None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR158583 HR-TB None
ERR176793 Other lineage4.1.1 None
SRR3675465 HR-TB None
SRR3675502 Other None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675221 HR-TB None
ERR4815471 Other lineage4.9 None
SRR3675236 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675311 Other None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814639 HR-TB lineage4 None
SRR3675232 Other lineage4.1.2.1 None
ERR4816964 Other lineage4.9 None
ERR4817060 RR-TB None
SRR3675550 Other None
ERR4816999 Other None
ERR2027263 Other lineage4 None
SRR3675574 HR-TB None
SRR3675572 Other None
ERR4817667 HR-TB lineage4.8 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR4815815 Sensitive lineage4 None
SRR3742665 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818710 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818021 Other La1.8.1 None
ERR4818347 Other lineage4.1.2 None
ERR2513229 MDR-TB lineage2.2.1 None
ERR4818394 Other lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR4819357 Other lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR5007188 Other lineage4 None
ERR4819280 Sensitive lineage4 None
ERR4819314 Other lineage1.1.1 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4819462 Other lineage4 None
ERR1023509 Other None
ERR4820854 Other lineage4.1.2.1 None
SRR5341418 Other None
ERR4819781 Other lineage2.2.1 None
SRR5341302 HR-TB None
SRR6045526 HR-TB None
ERR4819933 Other lineage4.9 None
SRR5341333 HR-TB None
SRR6045892 Sensitive None
ERR4821655 Sensitive lineage4 None
SRR6044855 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6045327 HR-TB None
SRR6046460 HR-TB None
SRR6046066 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046482 HR-TB None
SRR6046540 HR-TB None
SRR6046824 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
ERR4831997 MDR-TB lineage2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR502532 HR-TB None
SRR6789626 Other None
ERR502524 HR-TB La2 None
SRR6832787 RR-TB lineage2.2.1 None
ERR502889 Other None
SRR7496523 Other lineage4.7 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR7496517 Other None
ERR323043 HR-TB None
ERR067681 HR-TB None
ERR1034652 Other None
ERR1035157 Other lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR1063839 HR-TB lineage2.2 None
ERR1063857 HR-TB None
ERR3439432 Other None
ERR3283051 Other lineage4.9 None
ERR133986 HR-TB None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3797069 Other None
ERR3470647 Other lineage3 None
ERR3797058 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4769521 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4407452 Sensitive lineage3 None
ERR473334 HR-TB lineage4.9 None
ERR4769408 Other La1.3 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR4769552 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798406 HR-TB None
ERR4797201 Other lineage1.2.2.2 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4811105 HR-TB None
ERR4800341 Other lineage3 None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR4811142 MDR-TB None
ERR5336148 Other None
ERR6359069 Other lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR6866410 Sensitive None
ERR702404 HR-TB None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR6866807 HR-TB lineage4 None
ERR702406 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9117709 HR-TB None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR9634265 Sensitive None
ERR9786346 Sensitive lineage4.3.4.2 None
ERR9786604 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786617 Other lineage4.1.1 None
ERR9787030 Sensitive lineage6 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9786682 Other lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
ERR9787139 Other lineage6.3.1 None
ERR9787165 Other lineage6 None
ERR9787197 Other None