EBG00000313339 - n.1745C>T


Drug resistance types
18 Sensitive 8 RR-TB 61 HR-TB 36 MDR-TB 11 Pre-XDR-TB 3 XDR-TB 142 Other
lineage Counts
lineage Count
lineage5.2 4
lineage4.9 62
La3;lineage4.8 1
La3;lineage2 1
M.canetti;lineage4.9 2
La1.7 1
lineage4.3.3;lineage4.3.4.2 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage3 6
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1 18
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.1.2.1 15
22
lineage4.9;lineage6.3 6
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.3.4 1
lineage2.1;lineage4.9 10
La3;lineage2.1;lineage4.9 2
lineage4.8 6
La3;lineage3 1
lineage2.2.1.1 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 4
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 8
lineage2.2.1;lineage3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.6.2.2 3
lineage4.1.1.3 8
La3;lineage4.9 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.3;lineage4.6.1.2 1
La1;lineage4.9 1
lineage3.1.1 1
lineage1.2.2.1;lineage4.4.1.1 2
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.8;lineage4.9 1
lineage4.1 1
La1;lineage4.1.2 1
lineage1.2.2.2 1
lineage2.1 3
La3;lineage2.2.1 1
La1.7;lineage4.2 1
lineage4.3.3 5
lineage4.2;lineage4.6.3;lineage4.9.1 1
La1.2.BCG 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.3.4.1 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 3
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.2 1
lineage4.6.1.2 1
La1.7;lineage4.9 2
lineage2.2.1;lineage6.3 1
La1.8.1 2
lineage3.1 1
lineage4.1.1.1 4
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.1.3 2
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8.1 1
lineage4.4.1.2 1
lineage4.7 1
lineage6.3.1 1
lineage4.9.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 1
La1.6;La3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 2
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.3.2.1 1
lineage4.6.1.1 1
lineage4.3.4.2 1
lineage4.1;lineage4.8 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.2;lineage4 1
lineage4.2;lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 279
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR20969677 HR-TB La3;lineage2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675222 Other La1.7 None
ERR1034911 MDR-TB lineage4.3.3;lineage4.3.4.2 pt
SRR1196546 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR8692887 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR1173363 Other None
ERR9786843 Other None
SRR1184372 MDR-TB None
SRR6789626 Other None
ERR234659 HR-TB None
SRR25827682 Other None
ERR212001 HR-TB None
ERR6358979 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR22249687 Sensitive lineage4.8 None
SRR6045217 Other lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR1173633 Other lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
SRR15600376 HR-TB lineage2.2.1.1 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR3283030 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789621 Other lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR3797063 Other La3;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1213931 MDR-TB lineage4.3.3;lineage4.6.1.2 pe
ERR553132 MDR-TB lineage4.1.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR6785263 Sensitive lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR1196566 Other lineage4.9 None
SRR3675448 Other lineage4.9 None
ERR3797081 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
ERR3797064 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1175049 Other lineage4.8;lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR10561898 Sensitive lineage4.3.3 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR1915487 Other La1.2.BCG None
ERR9786645 Other lineage4.6.2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675572 Other None
ERR4796577 HR-TB None
ERR11252736 Other lineage4.9 None
SRR7535086 Other None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR779852 HR-TB lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR6785413 Other lineage2.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693252 HR-TB lineage4.9 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1034907 Pre-XDR-TB lineage4.3.4.1 pt
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR1035296 HR-TB lineage4.9 br
ERR2124083 HR-TB lineage4.6.1.2 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR3275201 Sensitive lineage4.8 nl
SRR1173355 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR6866410 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
SRR1181020 Other lineage2.2.1 None
ERR9119669 MDR-TB lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1173706 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797019 Other La1.8.1 None
SRR1173118 Other lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR3675248 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4799513 HR-TB lineage2.2 None
ERR3797070 Other lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR2446570 Sensitive lineage4.8 nl
ERR11466174 Other lineage4.8 None
SRR1181289 RR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035294 MDR-TB lineage4.1.2.1 br
SRR6044875 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR20969846 MDR-TB lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR2229542 Other lineage4.8 None
ERR3283040 HR-TB lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR9786601 Other lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4407452 Other lineage3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
SRR1173788 Sensitive lineage4.9 None
SRR8692905 Sensitive None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786671 Other None
SRR1175074 Other None
SRR28351341 Other lineage4.1.1.1 None
SRR1172857 Other None
SRR7496517 Other None
ERR4407463 HR-TB None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR28119777 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3675549 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR13423649 Other lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11465025 Other lineage4.1.1.3 None
ERR245758 Other lineage4.9.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR9896144 Other lineage3 None
ERR11466044 Other lineage4.1.1.3 None
SRR1173218 Other lineage4.3.3 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
SRR1173778 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR1173384 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1063849 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR4872094 MDR-TB lineage5.2 None
SRR1173562 Sensitive lineage4.9 None
ERR1213875 Sensitive lineage4.3.3 de
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
SRR10808399 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283010 Sensitive La1.8.1 None
SRR14782405 HR-TB lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
SRR1172844 Sensitive lineage4.9 None