EBG00000313339 - n.1166C>T


Drug resistance types
11 Sensitive 31 RR-TB 35 HR-TB 89 MDR-TB 7 Pre-XDR-TB 3 XDR-TB 138 Other
lineage Counts
lineage Count
lineage4.3.4.2.1 3
lineage2.2 2
lineage4.8 9
M.canetti;lineage2.1;lineage4.9;lineage6.3 4
lineage4.1.2.1 25
lineage2.2.1.1 1
La1.8.1 3
lineage3 4
La1;lineage4.9 1
lineage2.2.1 19
lineage4.9;lineage6.3 5
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.9 44
lineage2.1 3
M.canetti;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 10
lineage4.1;lineage4.8 2
M.canetti;lineage2.1;lineage4.9 20
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage6.3.1 3
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9 13
lineage4.1.3 2
lineage4.1 1
La3;lineage4.9 6
lineage4.3.3 8
La3;lineage2.1;lineage4.9 3
La3 2
lineage4.1.1.3 8
La1.7;lineage4.2 1
lineage2.1;lineage4.9;lineage6.3 7
lineage1.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
19
lineage1.2.2.2 2
lineage4.6.4 2
lineage1.1.2 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage3 2
M.canetti;lineage2.2 3
lineage4.6.1.1 1
lineage4 1
lineage2.2.1;lineage6.3 1
lineage4.6.2.2 3
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage3.1.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.3.4.1 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage5.2 2
lineage2.1;lineage4.3.2 1
La3;lineage2 1
lineage4.4.1.1 3
M.canetti;lineage2.1 1
La3;lineage2.2.1 1
lineage1.2.1.2.1 1
La1.7.1 1
lineage4.1.1.1 3
lineage4.4.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
lineage2.2.2 2
lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.3;lineage4.9 1
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage3.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage1.2.1.2 1
lineage4.2.1 1
lineage4.1.2.1.1 1
lineage1.1.1 1
lineage4.8.1 1
lineage6.1.3 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1;lineage3 1
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La1.2 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
spoligotype Counts
spoligotype Count
None 314
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176549 Other lineage4.3.4.2.1 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1791696 RR-TB La1.8.1 None
ERR990545 RR-TB lineage3 None
SRR23961542 Other La1;lineage4.9 None
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR502912 Other lineage2.2.1 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
ERR11489020 MDR-TB lineage2.2.1 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1173400 Other lineage4.9 None
ERR3804162 Sensitive lineage6.3.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR7496472 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
SRR3675448 Other lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1181289 RR-TB lineage2.2.1 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR11049020 Other lineage4.8 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR9786611 HR-TB lineage4.1.3 None
ERR9786440 Other lineage4.1 None
SRR1172844 Sensitive lineage4.9 None
SRR13861399 Other lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR13861396 HR-TB lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SRR1172817 Other La3 None
ERR11465024 Other lineage4.1.1.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4407452 Other lineage3 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675572 Other None
ERR11252548 Other lineage1.2.2.2 None
ERR9786671 Other None
ERR11252664 Other lineage2.2.1 None
ERR9786843 Other None
SRR1640750 RR-TB None
ERR234659 HR-TB None
SRR25827682 Other None
ERR4407463 HR-TB None
SRR28119805 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR9119508 MDR-TB lineage4.6.4 None
ERR9786515 Other lineage4.1.2.1 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3675549 Other lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR12015085 Other lineage4.8 None
ERR11465665 Other lineage4.1.1.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
ERR9786619 Sensitive lineage4.8 None
SRR26399973 Other La3;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
SRR25827856 MDR-TB lineage2.2.1;lineage3 None
SRR1173633 Other lineage4.9 None
SRR6831950 Sensitive lineage4.3.3 None
ERR11466242 Sensitive lineage4.1.1.3 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR1184312 Other lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR23961529 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR12015084 Other lineage4.8 None
SRR21690574 Other lineage4.1.2.1 None
ERR11466174 Other lineage4.8 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR11466499 Other lineage4.3.4.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR2503512 Sensitive lineage4.1.2.1 fi
ERR11465906 Sensitive lineage4.4.1.1 None
ERR11081258 Other lineage4.8 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR2229542 Other lineage4.8 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR4815752 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
ERR7821163 Other lineage2.2.1 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
SRR7496509 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28393898 Other lineage4.4.1 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
SRR1184372 MDR-TB None
SRR28044634 Other lineage3 None
ERR212001 HR-TB None
ERR9787197 Other None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR21733183 RR-TB lineage1.1.2 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
SRR13861510 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR502908 HR-TB lineage2.2.1 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR1165506 Other lineage4.1.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR11465025 Other lineage4.1.1.3 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR3797083 RR-TB lineage4.9 None
SRR1173330 Sensitive lineage4.3.3;lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR12015086 RR-TB lineage4.8 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR1173218 Other lineage4.3.3 None
SRR1181020 Other lineage2.2.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13861381 HR-TB lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3797023 MDR-TB La1.8.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1173706 Other lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173384 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR13861553 RR-TB lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR069989 HR-TB lineage2.2.2 None
ERR176793 Other lineage4.1.1.1 None
SRR5709967 MDR-TB lineage2.2.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR1172951 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9787223 Sensitive lineage6.3.1 None
SRR12006550 Other lineage1.2.1.2 None
ERR9786421 Other lineage4.1.2.1 None
SRR23310833 MDR-TB lineage4.2.1 None
SRR21732980 Other lineage4.3.3 None
ERR176751 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR1172728 RR-TB La3 None
ERR8665994 RR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR21690362 Other lineage1.1.1 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR1196546 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9787165 Other lineage6.1.3 None
SRR3675311 Other lineage4.9 None
ERR4813861 Other lineage4.3.3 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR9786645 Other lineage4.6.2.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR2199988 MDR-TB lineage4.1.1.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR1165584 Other lineage4.1.2.1 None
ERR9119096 RR-TB lineage4.3.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR18289200 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1173363 Other None
ERR11252612 Other La3;lineage4.9 None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR7535086 Other None
SRR1172857 Other None
SRR1196768 MDR-TB None
ERR1035157 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4800341 HR-TB lineage3 None
SRR3675507 RR-TB lineage4.9 None
SRR23961549 Other La1.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1173453 Other lineage4.4.1.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4586795 Other La1.8.1 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR3675482 RR-TB lineage4.9 None