Rv3793 - c.1521G>C
Drug resistance types
3 Sensitive
1 RR-TB
54 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| 73 | |
| lineage2.2.1 | 3 |
| lineage3.1 | 2 |
| lineage4.3.3 | 1 |
| lineage2 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 4 |
| lineage4.4.1.1 | 1 |
| lineage2.2 | 1 |
| lineage4.8;lineage4.3.3 | 1 |
| La2 | 1 |
| lineage4.8 | 2 |
| lineage4.4.1.1;lineage1.2.2.1 | 1 |
| lineage4.9 | 4 |
| lineage3 | 1 |
| lineage4.1.2.1 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 104 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196566 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR19303884 | HR-TB | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | ERR4815604 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675221 | HR-TB | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675311 | Other | None | SRR3675236 | HR-TB | None | SRR3675572 | Other | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675574 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR5341418 | Other | None | ERR1035162 | Other | None | ERR234659 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR5341333 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | ERR4830353 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6789626 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4812981 | MDR-TB | lineage4.8;lineage4.3.3 | pe | SRR6046824 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR2184602 | Sensitive | lineage4.8 | pe | ERR502532 | HR-TB | None | ERR3283027 | HR-TB | None | ERR323043 | HR-TB | None | ERR067681 | HR-TB | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR502889 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR133986 | HR-TB | None | ERR4810741 | HR-TB | None | ERR3283036 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4800341 | Other | lineage3 | None | ERR3439432 | Other | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR5336148 | Other | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR736874 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9117709 | HR-TB | None | SRR10808904 | Sensitive | lineage4.8 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | SRR1169194 | Other | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1172817 | HR-TB | None | SRR1173118 | Other | None | SRR1173629 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None |
|---|
