ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR9992827
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1173532
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1173118
|
Other
|
lineage2.2.1
|
None
|
ERR2514692
|
Other
|
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR6785413
|
Other
|
lineage2.2.1
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1167250
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR4817893
|
Other
|
La3;lineage4.8
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4819322
|
Other
|
lineage1.1;lineage4
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR3675574
|
Other
|
lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR6045526
|
Other
|
lineage4.9
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR29016901
|
Other
|
La3;lineage4.9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR1173403
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28119753
|
Other
|
lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
ERR8976013
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
ERR553132
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR6045327
|
Other
|
lineage2.1;lineage4.3.2;lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
SRR29051093
|
Other
|
lineage4.9
|
None
|
SRR18289195
|
Sensitive
|
M.canetti
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR11068570
|
Other
|
lineage4
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR551180
|
Sensitive
|
M.canetti
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SAMN02403513
|
MDR-TB
|
lineage4.3.3
|
za
|
ERR1043163
|
Other
|
La3;M.canetti
|
None
|
SAMN02403512
|
MDR-TB
|
lineage4.3.3
|
za
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR1336823
|
Sensitive
|
La3;M.canetti
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR266125
|
Other
|
La3;M.canetti
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR1336822
|
Sensitive
|
M.canetti
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR3275450
|
Other
|
lineage4
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675214
|
Other
|
lineage4.9
|
None
|
SRR10522763
|
Sensitive
|
M.canetti
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
SRR3675279
|
Sensitive
|
lineage4.9
|
None
|
SRR1167285
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR10522783
|
Sensitive
|
M.canetti
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR4815604
|
Other
|
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR6046066
|
Other
|
lineage4.9
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
ERR212123
|
Other
|
lineage4.9
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR29051077
|
Other
|
lineage4.9
|
None
|
ERR9786617
|
Other
|
lineage4.1.1.1
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
SRR1196474
|
Other
|
lineage3.1.1
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2514552
|
Sensitive
|
lineage3
|
None
|
ERR11465279
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR11466174
|
Other
|
lineage4.8
|
None
|
ERR11465235
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR3675236
|
Other
|
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR3283044
|
Other
|
lineage4
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR13267017
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11465232
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR9117709
|
Other
|
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR3675472
|
Sensitive
|
lineage4.9
|
None
|
ERR1043164
|
Other
|
La3;M.canetti
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
ERR1336826
|
Sensitive
|
La3;M.canetti
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
SRR29097037
|
Other
|
lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
SRR24061597
|
Sensitive
|
M.canetti
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR25827452
|
MDR-TB
|
lineage1.1.2;lineage2.2.1;lineage4.2.2.2
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR29096541
|
Other
|
lineage4.9
|
None
|
ERR266126
|
Sensitive
|
La2;M.canetti
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR551179
|
Sensitive
|
M.canetti
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
ERR4797285
|
MDR-TB
|
lineage1.2.2.2
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1173156
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR1175074
|
Other
|
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR3597004
|
Sensitive
|
M.canetti
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
SRR1165277
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR1336824
|
Sensitive
|
La3;M.canetti
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29093099
|
MDR-TB
|
La3;lineage2.2.2
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR1165327
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR1336825
|
Sensitive
|
La3;M.canetti
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR11465234
|
Sensitive
|
lineage4.1.2.1;lineage4.3.4.2.1
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR29093909
|
Other
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR266120
|
Sensitive
|
M.canetti
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR1336820
|
Sensitive
|
La3;M.canetti
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR1175351
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR1336821
|
Sensitive
|
La3;M.canetti
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR551182
|
Sensitive
|
M.canetti
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR29017081
|
Sensitive
|
lineage4.9
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|