Rv0668 - c.1141C>T


Drug resistance types
53 Sensitive 3 RR-TB 31 HR-TB 28 MDR-TB 4 Pre-XDR-TB 1 XDR-TB 146 Other
lineage Counts
lineage Count
lineage4.9 59
lineage4.2.1 1
M.canetti 10
lineage4.9;lineage6.3 5
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1 5
lineage2.1;lineage4.9 14
lineage4 5
lineage4.2.2.2 1
lineage1;lineage4.9 1
lineage4.3.4.2.1 4
La3;lineage4.3.4 1
lineage2.2.2 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.2.1 15
lineage4.3.2 1
La3;lineage4.9 2
lineage4.8 6
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.4.1 3
lineage2.2.1 15
lineage4.3.3 14
lineage4.8.1 1
La3 2
La3;lineage2.2.1 1
lineage6.1.3 2
La3;M.canetti 9
lineage4.1;lineage4.9 1
lineage1.1.1;lineage4 1
lineage5.1.4 1
lineage4.1.1.1 3
20
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.7 1
La3;lineage1.1.2 1
lineage1.1;lineage4 1
lineage3 3
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 2
lineage4.5 1
lineage3.1.1 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.1 1
La3;lineage2 1
lineage4.1.2 1
lineage4.1.1.3 2
lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
lineage6.3.1 1
La2;M.canetti 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage4.9 1
lineage2.2.1;lineage3 1
lineage4.1.3 2
lineage4.1.2.1;lineage4.3.4.2.1 1
lineage1.1.2;lineage2.2.1;lineage4.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.1.3;lineage4.9 2
lineage4.6.2.2 1
lineage4.6.3;lineage4.9 1
La3;lineage4.8 1
lineage2.2.1;lineage4 1
spoligotype Counts
spoligotype Count
None 266
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR10522783 Sensitive M.canetti None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
SRR24061597 Sensitive M.canetti None
ERR2513470 Other lineage4.2.2.2 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6789621 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR181744 HR-TB La3;lineage4.9 None
ERR551180 Sensitive M.canetti None
SRR1184294 Other lineage4.9 None
ERR11466174 Other lineage4.8 None
SRR3675541 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR3675229 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR3675457 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1175351 MDR-TB lineage4.3.3 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR6044819 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SAMN02403512 MDR-TB lineage4.3.3 za
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR1043164 Other La3;M.canetti None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR2446382 Other lineage4 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR2513283 Sensitive lineage5.1.4 None
ERR9786617 Other lineage4.1.1.1 None
ERR161037 HR-TB lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR18289195 Sensitive M.canetti None
ERR9786671 Other None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1173363 Other None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
SRR6046611 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1175496 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR9992827 MDR-TB lineage4.3.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR3675455 Sensitive lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR4799025 Other lineage4.8 None
SRR1173403 MDR-TB lineage4.3.3 None
SRR6045526 Other lineage4.9 None
ERR8976013 MDR-TB lineage4.3.3 None
ERR266120 Other M.canetti None
ERR400345 Other lineage4.9 None
SRR1165327 MDR-TB lineage4.3.3 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR1336825 Sensitive La3;M.canetti None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
SRR1173400 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
SRR3675248 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR4797285 MDR-TB lineage1.2.2.2 None
SRR3675522 Other lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR1336822 Sensitive M.canetti None
ERR1336823 Sensitive La3;M.canetti None
SRR1196566 Other lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
SRR5341296 Sensitive lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4812155 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786440 Other lineage4.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SAMN02403513 MDR-TB lineage4.3.3 za
ERR4818347 Other lineage4.1.2 None
ERR1043163 Other La3;M.canetti None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
ERR4815752 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
SRR3675311 Other lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1336826 Sensitive La3;M.canetti None
SRR2010299 MDR-TB lineage2.2.1 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR551179 Sensitive M.canetti None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786604 Other None
ERR4815604 Other None
ERR9117709 Other None
ERR2514692 Other None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
SRR12708416 Sensitive None
ERR266125 Other La3;M.canetti None
ERR1035157 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR6785413 Other lineage2.2.1 None
SRR1710057 Other lineage2.1 None
ERR3275450 Other lineage4 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1165277 MDR-TB lineage4.3.3 None
SRR3675214 Other lineage4.9 None
SRR1167250 MDR-TB lineage4.3.3 None
ERR266126 Other La2;M.canetti None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR11465234 Sensitive lineage4.1.2.1;lineage4.3.4.2.1 None
SRR1175508 Sensitive lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR1173156 MDR-TB lineage4.3.3 None
ERR2514552 Sensitive lineage3 None
SRR6785263 Sensitive lineage2.2.1 None
ERR551182 Sensitive M.canetti None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR1336820 Sensitive La3;M.canetti None
SRR21732980 Other lineage4.3.3 None
SRR1173532 MDR-TB lineage4.3.3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR11049020 Other lineage4.8 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR25827452 MDR-TB lineage1.1.2;lineage2.2.1;lineage4.2.2.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR2517475 Other lineage4 None
SRR12708419 Other lineage4.3.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR7496509 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1184372 MDR-TB None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR3597004 Sensitive M.canetti None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR1336821 Sensitive La3;M.canetti None
ERR4817893 Other La3;lineage4.8 None
SRR3675549 Other lineage4.9 None
ERR9787336 RR-TB lineage6.1.3 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR10522763 Sensitive M.canetti None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR11465025 Other lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR1336824 Sensitive La3;M.canetti None
SRR3675473 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None