Rv3547 - c.-199G>A


Drug resistance types
3 Sensitive 8 RR-TB 30 HR-TB 15 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 29 Other
lineage Counts
lineage Count
lineage4.3.4.1 5
M.canetti;lineage2.1;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 6
lineage4.9 19
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.2 2
7
lineage4.5 1
lineage3 1
La3;lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage2.2 1
lineage2.1 1
lineage4.4.1.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage5.2 2
La3 1
La3;lineage4.9 3
lineage2.2.1.1 2
La3;lineage2 1
lineage4.1.2 1
lineage1.2.2.2 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9 4
lineage4.3.4.2.1 2
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.9 1
lineage4.8 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1 1
La1.7;lineage4.9 1
spoligotype Counts
spoligotype Count
None 86
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1193784 Sensitive lineage4.3.4.1 br
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3797046 HR-TB lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR20970016 Other lineage2.2 None
SRR1184381 MDR-TB None
ERR234659 HR-TB None
ERR752229 Other lineage4.5 None
SRR3675441 RR-TB lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173400 Other lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR1172951 Other lineage4.9 None
SRR13583382 HR-TB lineage4.3.4.1 None
ERR4769474 HR-TB lineage4.9 None
SRR1172728 RR-TB La3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR2653003 Sensitive lineage4.3.4.1 None
SRR1165628 Other La3;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4818347 Other lineage4.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR212033 Other lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR176751 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR3797047 MDR-TB lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR473332 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR6046485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
SRR7535086 Other None
ERR212001 HR-TB None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR4816151 Other lineage4.8 None
ERR9119669 MDR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR2653154 MDR-TB lineage4.3.4.1 None
ERR161149 Sensitive lineage4.3.4.2.1 mw
ERR1023525 HR-TB La1.7;lineage4.9 None