lineage | Count |
---|---|
10 | |
lineage5.2 | 2 |
lineage4.8 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4 | 1 |
lineage4.6.2.2 | 2 |
lineage2.2 | 5 |
lineage3 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 1 |
lineage1.1.3.2 | 1 |
lineage4.3.4.1 | 1 |
lineage1.2.1.2 | 1 |
lineage4.2;La1.7 | 1 |
spoligotype | Count |
---|---|
None | 31 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675488 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR6046133 | HR-TB | None | SRR6046225 | HR-TB | None | ERR4830353 | Other | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR3797036 | HR-TB | None | SRR3675501 | HR-TB | None | ERR212034 | HR-TB | None | ERR176527 | Sensitive | lineage4.3.4.2.1 | mw | SRR6045555 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR702404 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR990545 | Other | lineage3 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR18910194 | HR-TB | lineage2.2 | None |
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