Rv1484 - c.678T>G


Drug resistance types
35 Sensitive 5 RR-TB 33 HR-TB 17 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 47 Other
lineage Counts
lineage Count
lineage4.9 63
lineage4.3.4.2.1 1
La1.7;lineage3;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9 5
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
1
La2;lineage2.2 1
lineage4.1.2 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage3 1
La1.7 1
La2;lineage4.9 1
lineage4.8 1
La3;lineage4.3.4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4.2.1 1
lineage4.3.4.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9;lineage7 3
lineage1.1.1 1
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.2 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.2 2
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
La1.8.1 1
M.canetti;lineage4.2 1
lineage4 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.6;La3;lineage4.9 1
La1.7;lineage3.1;lineage4 1
M.canetti;lineage1 1
lineage4.3.2.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 138
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR779852 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR5311094 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR5341299 HR-TB lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR10808730 Other lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR1063896 Sensitive None
ERR502511 Sensitive lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR4830353 Other La1.7 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9786444 Sensitive lineage4.8 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341461 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR971389 Sensitive lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR12416842 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR29050859 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3283018 HR-TB lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
ERR926156 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR926165 Sensitive lineage4.9 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR3797060 Other La1.8.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR5341469 HR-TB lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR6866807 Other lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR736872 HR-TB lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR702405 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR15014655 Other M.canetti;lineage1 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341308 Sensitive lineage4.9 None