Rv0667 - c.1200C>T
Drug resistance types
47 Sensitive
18 RR-TB
18 HR-TB
29 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 79 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage3 | 2 |
| lineage4.8 | 1 |
| lineage4 | 4 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.9;lineage9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage7 | 4 |
| M.canetti;lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.7;lineage4.9 | 5 |
| M.canetti;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.1 | 2 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 3 |
| La1.7;lineage4.9;lineage7 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7 | 1 |
| lineage4.3.4.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 1 |
| 1 | |
| lineage4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 171 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR363506 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675586 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR373946 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | SRR12062522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR6045371 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR373947 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR363446 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR8651654 | Pre-XDR-TB | lineage2.2.1 | cn | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR21732412 | Other | lineage2.2.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR363421 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR3675265 | Other | lineage4 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR349265 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR10040156 | Pre-XDR-TB | lineage2.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1035162 | MDR-TB | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR3801503 | Other | lineage4.6.2.2 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | ERR4188322 | Other | lineage4.6.4;lineage4.9 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR363502 | Other | lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363453 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR502889 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR363500 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR3439432 | RR-TB | M.canetti;lineage4.6.4;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR3675390 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR3675446 | RR-TB | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | ERR349264 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | ERR349300 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363449 | Other | lineage4.9 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR12062521 | Pre-XDR-TB | lineage2.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
|---|
