Rv1630 - c.1218A>C
Drug resistance types
66 Sensitive
13 RR-TB
100 HR-TB
18 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
85 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.9 | 156 |
| 4 | |
| lineage3 | 7 |
| lineage4.1.1.3 | 1 |
| La1.2.BCG | 3 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1 | 15 |
| lineage2.2.1;lineage4 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage1.2.1.1 | 1 |
| lineage4.6.3;lineage4.9 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4.3.3 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La3;lineage4.9 | 9 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| lineage4.8 | 3 |
| lineage4.1.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.2.1 | 1 |
| La1;lineage4.9 | 3 |
| lineage2.1;lineage4.9 | 1 |
| lineage4 | 7 |
| La1.2;La1.8.1 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.5 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage3;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| La3;lineage4 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage2.2.1;lineage3;lineage4 | 1 |
| lineage1.1.1 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 288 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR971389 | Other | lineage4.9 | None | ERR234659 | HR-TB | None | SRR28351347 | Other | lineage3 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR779852 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR867566 | Other | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR473323 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | SRR12708416 | Sensitive | None | SRR6045795 | Other | lineage2.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR137286 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR990545 | RR-TB | lineage3 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063855 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR1063896 | HR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR25827605 | Pre-XDR-TB | lineage2.2.1;lineage3;lineage4 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR4811030 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR3675585 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR6045706 | Other | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR4796254 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR6044875 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR926164 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675246 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797184 | HR-TB | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None |
|---|
