Rv0668 - c.1036_1038delAGGinsCC
Drug resistance types
124 Sensitive
46 RR-TB
171 HR-TB
65 MDR-TB
23 Pre-XDR-TB
5 XDR-TB
153 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 9 |
| lineage4.9 | 252 |
| lineage2.2.1;lineage4.5 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 2 |
| lineage2.2.2 | 23 |
| lineage2.2.1;lineage4 | 5 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage2.2.1;lineage2.2.2 | 4 |
| lineage4.1.1.3 | 5 |
| La1.3 | 1 |
| lineage4.4.1.1 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 9 |
| lineage2.2.1 | 55 |
| lineage3 | 14 |
| lineage4 | 14 |
| La1.7 | 1 |
| lineage2.2.1.1 | 7 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage3.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| La1.7.X-unk4 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.3.2.1 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.2;lineage4 | 5 |
| lineage4.5 | 4 |
| La1.7;lineage4.9 | 11 |
| lineage4.6.3;lineage4.9 | 1 |
| 5 | |
| lineage3.1;lineage9 | 1 |
| lineage2.2 | 2 |
| La1.2 | 1 |
| lineage4.2;lineage4.9 | 3 |
| lineage2;lineage4.9 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| La1.8.1 | 7 |
| lineage4.3.3 | 6 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| La1.7;M.canetti;lineage4.9 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.8 | 8 |
| M.canetti;lineage4.9 | 4 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage2.2;lineage4 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.4 | 1 |
| La1.2.BCG | 2 |
| M.canetti;lineage2.2 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4.1 | 4 |
| La2;lineage2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage1.1.2 | 2 |
| La2;lineage4.9 | 2 |
| lineage1.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage6.1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.7 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.2.1 | 2 |
| lineage2.2;lineage4.9 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage2 | 1 |
| lineage1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.6.5 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| La2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1.3 | 1 |
| La1;lineage2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 587 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283011 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR349299 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013617 | Sensitive | lineage2.2.1;lineage4 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR1049027 | HR-TB | lineage2.2.2;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR3797081 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR2517457 | Sensitive | lineage3 | None | ERR4816478 | HR-TB | lineage4 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR2517475 | Other | lineage4 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR2446382 | Other | lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR1183144 | RR-TB | lineage2.2.1 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1013597 | Sensitive | lineage2.2.2;lineage4 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR28351339 | MDR-TB | lineage4 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR23961549 | Other | La1.2 | None | SRR1180345 | Other | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | ERR4816964 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1013613 | Sensitive | lineage2.2.1 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR1013596 | Sensitive | lineage3 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | ERR4188213 | Other | La1.8.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3273109 | HR-TB | lineage4 | None | ERR363498 | Other | lineage4.9 | None | SRR1013608 | Sensitive | lineage2.2.2 | None | SRR3675522 | Other | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR5341453 | Other | lineage4.9 | None | SRR1181289 | RR-TB | lineage2.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1013610 | Sensitive | lineage4 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR363453 | Other | lineage4.9 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2;lineage4 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6044835 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341425 | Other | lineage4.9 | None | SRR1048981 | HR-TB | lineage3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR16278274 | Other | La1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1013618 | RR-TB | lineage2.2.1;lineage4 | None | SRR6045503 | Other | lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR349266 | Other | lineage4.9 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1049023 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR1063896 | HR-TB | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR363449 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4817998 | Other | lineage3 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | ERR373945 | Other | lineage4.9 | None | SRR1013634 | MDR-TB | lineage2.2.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR1013598 | Sensitive | lineage2.2.2;lineage4 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4817204 | Other | lineage4.9 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | ERR926165 | Other | lineage4.9 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | ERR349264 | Other | lineage4.9 | None | SRR1013584 | HR-TB | lineage2.2.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | SRR5341387 | Other | lineage4.9 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | ERR4796254 | Other | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR3283014 | Other | La3;lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4821276 | Sensitive | lineage3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR473332 | Other | lineage4.9 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1180172 | RR-TB | lineage2.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR3283021 | MDR-TB | lineage4.9 | None | ERR363479 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR11465579 | Sensitive | lineage4.3.4.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | ERR363456 | Sensitive | lineage4.9 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | ERR9786843 | Other | None | ERR234659 | HR-TB | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR1048965 | HR-TB | lineage2.2.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR3797067 | Other | La1.8.1 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR9786076 | Other | lineage3 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR1013612 | Sensitive | lineage4.5 | None | SRR1791747 | Other | La1.8.1 | None | ERR4820773 | HR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR9896144 | Other | lineage3 | None | ERR3283031 | Other | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR736848 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR7236233 | Other | La1.8.1 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR4769521 | RR-TB | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR3797019 | Other | La1.8.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR7236177 | Other | La1.8.1 | None | SRR1062920 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049040 | HR-TB | lineage2 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4811031 | Other | lineage4.5 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR926156 | Other | lineage4.9 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR990545 | RR-TB | lineage3 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR1049004 | HR-TB | lineage2.2.2 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | SRR1048996 | Sensitive | lineage4.5 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR1013609 | Sensitive | lineage4 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1013633 | MDR-TB | lineage2.2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR13888750 | Other | La2 | None | ERR926158 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR1013614 | Sensitive | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | ERR926157 | Other | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | DRR213597 | MDR-TB | lineage2.2.2 | None | ERR323066 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4811030 | Other | lineage4.9 | None |
|---|
