lineage | Count |
---|---|
lineage4.9 | 44 |
M.canetti | 10 |
lineage4.1.2.1 | 5 |
La3;M.canetti | 9 |
lineage2.2.1 | 2 |
lineage4 | 4 |
lineage5.2 | 2 |
lineage4.7 | 1 |
lineage4.1.1.1 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage4.3.3 | 1 |
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 1 |
La2;M.canetti | 1 |
lineage4.3.4.1 | 3 |
lineage4.1;lineage4.9 | 1 |
La1.7;lineage4.9 | 2 |
M.canetti;lineage4.9 | 1 |
lineage4.8 | 1 |
lineage4.3.2.1 | 1 |
lineage5.1.2 | 1 |
spoligotype | Count |
---|---|
None | 94 |
ID | Drug resistance | Lineage | Country iso2 | ERR363498 | Sensitive | lineage4.9 | None | SRR10522763 | Sensitive | M.canetti | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR1336824 | Sensitive | La3;M.canetti | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR18289195 | Sensitive | M.canetti | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR551182 | Sensitive | M.canetti | None | ERR373947 | Other | lineage4.9 | None | ERR1043164 | Other | La3;M.canetti | None | ERR349296 | Sensitive | lineage4.9 | None | ERR1043163 | Other | La3;M.canetti | None | SRR7496523 | Other | lineage4.7 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR551179 | Sensitive | M.canetti | None | ERR369162 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR369158 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR363421 | Sensitive | lineage4.9 | None | SRR10522783 | Sensitive | M.canetti | None | SRR5341330 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR266120 | Sensitive | M.canetti | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR4816100 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR363447 | Other | lineage4.9 | None | ERR1336821 | Sensitive | La3;M.canetti | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR1336826 | Sensitive | La3;M.canetti | None | ERR551180 | Sensitive | M.canetti | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR24061597 | Sensitive | M.canetti | None | ERR363500 | Sensitive | lineage4.9 | None | ERR266126 | Sensitive | La2;M.canetti | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR29772570 | Other | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR3597004 | Sensitive | M.canetti | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR349265 | Other | lineage4.9 | None | ERR1336825 | Sensitive | La3;M.canetti | None | ERR6865502 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR1336820 | Sensitive | La3;M.canetti | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR363502 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | ERR1336823 | Sensitive | La3;M.canetti | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR266125 | Other | La3;M.canetti | None | ERR1336822 | Sensitive | M.canetti | None |
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