Rv0529 - c.-219A>T


Drug resistance types
0 Sensitive 2 RR-TB 25 HR-TB 1 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 54 Other
lineage Counts
lineage Count
lineage4.9 7
lineage4.6.1.1 1
lineage2.1;lineage4.9 11
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.1.1.1 2
lineage2.1;lineage4.9;lineage6.3 8
M.canetti;lineage2.1;lineage4.9 2
lineage2.2.1 3
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
lineage4.9;lineage6.3 3
13
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage2.2.2 1
La3;lineage4.9 2
lineage2.1;lineage6.3 1
lineage2.2.1;lineage6.3 1
lineage4.1.3 2
lineage4.3.4.1 1
lineage4.1.2.1 3
La3;lineage2 1
lineage3 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1 3
lineage4 1
lineage3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3 1
La3;M.canetti;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 84
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675214 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786604 Other None
ERR9117709 Other None
ERR212001 HR-TB None
ERR4816999 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675457 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1172817 Other La3 None
SRR5341456 Other lineage4.9 None
ERR9786843 Other None
SRR7535086 Other None
ERR4407463 HR-TB None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None