Rv0668 - c.-164_-162delAGTinsTCG


Drug resistance types
10 Sensitive 7 RR-TB 35 HR-TB 16 MDR-TB 4 Pre-XDR-TB 3 XDR-TB 134 Other
lineage Counts
lineage Count
lineage2.2.1 15
lineage3 3
lineage4.3.4.2.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La1.7;lineage4.9 6
19
lineage4.8 5
lineage4 2
lineage4.9 30
lineage2.2.1;lineage6.3 1
lineage4.6.2.2 3
La3;lineage4.9 9
lineage2.1;lineage4.9 14
La3 2
lineage2.1 3
M.canetti;lineage2.1;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage3;lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage6.3 10
lineage4.1.2.1 8
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage5.2 2
lineage4.3.3 2
lineage4.9;lineage6.3 7
lineage4.2;lineage4.9 3
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.1.1.3 1
La3;lineage1.1.2 1
La1.7 1
lineage2.2.1;lineage3 1
lineage4.1;lineage4.8 1
lineage3.1.1 1
lineage4.1.3 2
lineage4.3.4.1 1
lineage2.1;lineage6.3 2
La3;lineage2.2.1 2
La3;lineage2.1;lineage4.9 2
lineage2.2.1.1 3
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
lineage4.1.1.1 2
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
La2;lineage2.2 1
lineage1.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.7.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.9;lineage7 3
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.2 2
lineage1.2.1.2 1
lineage6.1.3 1
La3;lineage2.1;lineage6.3 1
lineage6.3.1 1
lineage1.1.2 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 209
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675267 Other La1.7;lineage4.9 None
ERR4815604 Other None
ERR9786444 Sensitive lineage4.8 None
ERR2027263 Other lineage4 None
ERR4769521 RR-TB lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4797588 MDR-TB lineage3 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6785263 Sensitive lineage2.2.1 None
ERR3283044 Other lineage4 None
SRR1172728 RR-TB La3 None
ERR702406 Other lineage2.1 None
ERR9117709 Other None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
SRR3675488 Other La1.7;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786843 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
ERR181824 HR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR4819781 Other lineage2.2.1 None
ERR736875 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR29051043 Other lineage4.3.3 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR18003019 Other lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4830353 Other La1.7 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR26159043 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR1063862 HR-TB lineage4.9 None
SRR3675236 Other None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11049020 Other lineage4.8 None
SRR7535086 Other None
ERR3797064 Other La3;lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1184294 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR1173118 Other lineage2.2.1 None
ERR2514692 Other None
SRR25827682 Other None
SRR1172857 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR9786421 Other lineage4.1.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1184372 MDR-TB None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR29051093 Other lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR3797048 Other La3;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR4816999 Other None
SRR29016901 Other La3;lineage4.9 None
SRR6789626 Other None
ERR3797063 Sensitive La3;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
ERR11081258 Other lineage4.8 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1180147 Other lineage2.2.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR3804155 Other lineage4.1.2.1 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR9787197 Other None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1173633 Other lineage4.9 None
SRR3675457 Other lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096541 Other lineage4.9 None
ERR9787165 Other lineage6.1.3 None
SRR1173778 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
SRR18213713 HR-TB None
ERR9787139 Other lineage6.3.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR3675492 Other La1.7;lineage4.9 None