Rv2245 - c.474T>C


Drug resistance types
3 Sensitive 16 RR-TB 45 HR-TB 28 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 77 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 2
lineage1.1.2;lineage4 1
lineage4.9 12
M.canetti;lineage4.9 1
lineage2.1;lineage6.3 2
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
55
lineage2.1;lineage2.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.3.4.2.1 2
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.9 8
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 8
lineage4.7 1
lineage2.2.1 5
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2 4
lineage4.6.4;lineage4.3.4;lineage4.1.1;La3 2
lineage5.3;lineage5.1.4 3
La3 4
lineage4.8 4
lineage4.6.4;lineage4.3.4;lineage4.1.1.3;La3 1
La1;lineage4.9 1
M.canetti;lineage2.2 1
lineage4.9;lineage6.3 1
La1.7;lineage4.9 4
lineage3 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage4.2;lineage4.9 1
lineage4.1.2.1 3
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La3;lineage4.9 1
La3;M.canetti;lineage4.9 2
La1.7;M.canetti;lineage4.9 1
La1.2 1
M.canetti;lineage4.6.4;lineage4.9 1
M.canetti;lineage2.1;lineage4 1
lineage2.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage3.1 1
La3;M.canetti;lineage2.1;lineage4.9 1
La3;lineage1.1.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4 2
La1.8 1
lineage4.8.1;lineage4.6.4;lineage4.3.4;lineage4.2;lineage4.1.1 1
La1.7;La1.6 1
lineage1.1.1 1
lineage4.3 1
lineage6.3.2;lineage4.5;lineage4.3.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage3.1;lineage9 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 174
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
SRR3675441 RR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786671 Other None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1640750 RR-TB None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR5535933 Other lineage4.9 None
ERR5162090 RR-TB lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1196677 Other lineage2.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
9d6b11a1-a685-4338-bdf7-e93f965d0c2a Other lineage4.6.4;lineage4.3.4;lineage4.1.1;La3 None
68e4f2ce-e6ec-4697-947f-b12e97b7ba49 Other None
f03ce76d-aec1-4e51-a1c3-d825c8f77a65 Other lineage5.3;lineage5.1.4 None
19f5022a-f631-4e14-93d0-39924f30a07f Other None
9ee578d7-f578-416a-96bf-335cd73eca7a HR-TB La3 None
218c4d09-b0d3-4bbc-b907-8858738ed95e HR-TB None
162e9a10-9a7d-430d-b797-dbd77bf684cc Other lineage4.8 None
5c545d0e-4100-46ce-bbe5-cb2fd647e27b Other None
eb8da2c7-160f-4368-983f-b78baacae5c8 HR-TB None
a329c13e-ae92-4e7f-82f1-543555de7ee8 Other None
0e83c857-7bed-40b1-b200-86a8dcef8eed Other lineage5.3;lineage5.1.4 None
c63330fe-c872-4654-9fc2-c704fdf25203 Other None
0e2a2409-bbdf-4cc5-bd48-32b132150f4e Other None
df0f79c2-92eb-4f05-a796-1fd95fc13a0a Other La3 None
5ea96644-d035-4ca4-8369-a767b1f5d9c7 HR-TB None
57f8d438-5766-47c0-b69f-7eaae89dd9fb Other None
9a2555cc-c5d0-4c9b-af48-22d28119acc0 Other lineage4.6.4;lineage4.3.4;lineage4.1.1.3;La3 None
3b39419e-d662-4922-8dfb-c4abb9c92657 HR-TB None
7ee9c984-9526-4c01-aa19-4ac33498c3df HR-TB lineage2.2 None
6cfd23b4-2266-42e7-a020-42eb65b73bfb Other None
b0f31eb2-1056-4d67-b907-6f687044efa4 HR-TB None
SRR1196583 Other lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3675385 Other La1.7;lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9117709 Other None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4821053 RR-TB lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR3797048 Other La3;lineage4.9 None
SRR3675390 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
79baca4a-a69a-4980-b9ee-12a7742d919b Other None
22d66166-2394-4dae-8447-b8d4b6f8ba0a HR-TB lineage4.3.4.2.1 None
62710dec-9126-404a-b1a2-d257cb793828 HR-TB None
6c1db1bb-e2cd-4c4e-95a7-37622c28821f Other None
70c04da5-2c60-440c-aa5e-672043796574 HR-TB None
d00c459c-22ee-45a9-a860-7035d6fba317 HR-TB None
21b1ad98-1c41-4923-b819-5ebba3a29d38 Pre-XDR-TB None
d3107dbe-d309-4436-a64a-b0fb58bd8bb6 HR-TB None
b40d13a7-26ed-4f8d-b392-f3e5b6b196ea Other lineage4.1.1.3 None
987c250a-5b0f-4596-b8b2-9dac287656a1 Other None
b22cc88d-171e-4d35-8e44-6fffc20aa85f HR-TB None
06e40c38-60f8-4999-902e-189f3189d9bd Other None
bba8eb1f-8948-4dce-9955-b8ef0442ba90 Sensitive None
c3a50fb9-4309-411d-b92d-0c956d76d723 Other lineage5.3;lineage5.1.4 None
1564d8bc-c7e2-4deb-8647-4dc3fb915de7 Other lineage2.2 None
2de98e7a-dd72-4756-984e-647c8651dc30 RR-TB lineage2.2.1 None
4ee407d4-e109-4e4b-be80-bda90482856a Other La3 None
30b8217e-5718-440f-8fe2-22db59dd1182 Other None
77be862d-c50d-48c3-9c3c-ea5c987e588f HR-TB None
4b9ad7db-a750-462a-8bf5-ec5928801204 HR-TB None
c15e4354-0d1a-489c-b2a4-a86314f060ee Other None
8a1375a0-53e6-4426-ba2f-ab710f67e63c HR-TB None
a30f3af2-b0cf-4f6e-9c05-848428fb6b95 Other None
033fc7a4-cedc-4f53-bf83-85e03cc293f4 Other None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR2514327 HR-TB lineage4.8 None
SRR23961549 Other La1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3439432 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
SRR1710057 Other lineage2.1 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR6045217 Other lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR18003019 Other lineage2.2.1 None
ERR3797065 RR-TB lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR1162740 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR9786569 Other lineage4.8 None
1e914269-a115-47dd-ab6a-e039276553a0 Other None
e36cc082-9ce5-484d-b7b0-09670e6f3253 HR-TB None
50cd1905-4739-4e51-a1e1-0b509d73fffc HR-TB None
003321d9-7fa6-4250-84bf-99c2e1f7ca3b Other None
5b31bfaf-c699-45bd-8fff-d156014201ff Pre-XDR-TB lineage2.2.1 None
61cb4b39-70f6-48fa-bef3-fda12d085707 Other None
fd22771a-ec72-4976-8098-5b6823f90241 Sensitive None
b50f9ef3-fc92-4938-b3fd-a7f534e592fc HR-TB None
a4ef51cf-09fb-4b4e-a8cd-2f5384d8ac4a MDR-TB None
6af4b527-4fcf-43b8-a5be-5f2b9685379a HR-TB lineage4 None
a0355179-10ce-4bfb-8cdd-bb24690490d9 Other None
28ef168a-0ba1-4073-b822-163e8b00a440 HR-TB La1.8 None
81ff8df5-dde2-46d8-84a1-f1ecb3aa3638 HR-TB None
6a10e208-a122-4cd9-b048-b159230db286 Other None
ca61bade-cc49-4f9f-b28c-66d8a4fcb265 HR-TB None
7e499d3e-e73e-4d6f-9a2b-a952c0be0821 HR-TB None
32cfb0ef-e520-46e3-8899-846b8dc6e08a HR-TB None
6ce48a17-15ff-4392-8155-09a5b28dd29d Other lineage4.8.1;lineage4.6.4;lineage4.3.4;lineage4.2;lineage4.1.1 None
56d9dc1b-8bfc-4c4f-a6f3-a7122c9eb8de Other None
bc0c7498-7804-42b5-8d3f-01eaf4eafafb HR-TB None
ebf4cd98-4bdc-43bf-a552-28f296a18688 Other La3 None
8d26ba34-c013-4d68-b9d1-ab5b591d8832 Other La1.7;La1.6 None
d82542a4-d71c-40c9-ad70-1cb3b522f644 Other lineage1.1.1 None
185b3a4c-2446-4baa-a045-836980dccca5 Other None
be314fe3-6afd-497d-8937-212d8473c637 Other None
049984a2-67e9-4078-bb81-f4786d41d05c HR-TB lineage4.3 None
4d85a0e4-9558-44df-b81b-37888f067dfb Other None
aa4bcf12-d64d-4acb-8f5f-e1faa38e3ba4 HR-TB lineage4 None
5a444780-b54d-4e3e-8a68-1bdf680f1e28 Other None
213dd23d-35c8-4c58-8dfb-2d9ede81dc8f Other lineage4.6.4;lineage4.3.4;lineage4.1.1;La3 None
02d67aa9-caf5-4fb5-9dc3-d06b9655fc6b HR-TB lineage6.3.2;lineage4.5;lineage4.3.1 None
86251b58-9c36-4408-a023-6f8b9b0e79fc Other None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR752229 Other lineage4.5 None