Rv0005 - c.1053G>T
Drug resistance types
17 Sensitive
0 RR-TB
9 HR-TB
1 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage2.2.2 | 1 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| La1;lineage4.1.2 | 1 |
| La1.7;lineage4.2 | 1 |
| 2 | |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.2 | 2 |
| lineage4.1.2.1 | 3 |
| lineage2.2.1.2;lineage7 | 1 |
| La3;lineage4.9 | 5 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage3.1.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323115 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | ERR2514692 | Other | None | ERR234659 | Other | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR6358979 | Other | lineage4.9 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR6045526 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR6044835 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR11252612 | Other | La3;lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR6046210 | Other | lineage4.9 | None |
|---|
