Rv2477c - c.897G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
13 Sensitive
1 RR-TB
18 HR-TB
3 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
63 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.1;lineage4.9 | 10 |
| lineage6.3.1 | 2 |
| lineage2.2.1 | 8 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.7 | 2 |
| lineage4.3.4.1 | 1 |
| lineage3 | 1 |
| 14 | |
| lineage3.1.2.1 | 1 |
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9 | 14 |
| lineage2.1;lineage4.9;lineage6.3 | 5 |
| lineage4 | 2 |
| lineage4.8 | 5 |
| lineage4.1.3 | 2 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.1 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage7 | 3 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.2.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage3.1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| lineage4.2.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 101 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR3804162 | Sensitive | lineage6.3.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819932 | Sensitive | lineage4.7 | None | ERR9787223 | Sensitive | lineage6.3.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | DRR189016 | Sensitive | lineage2.2.1 | None | SRR7496509 | Other | None | ERR4797913 | Sensitive | lineage3.1.2.1 | in | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786604 | Other | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675275 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2027263 | Other | lineage4 | None | ERR4800341 | Other | None | ERR4816999 | Other | None | ERR2517514 | Sensitive | lineage4.8 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | None | ERR3283044 | Other | lineage4 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675457 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675214 | Other | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR1035157 | Other | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | ERR2514390 | Sensitive | lineage3.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR6789626 | Other | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR9117709 | Other | None | SRR3675549 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR6785268 | Sensitive | lineage4.2.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR2229542 | Other | lineage4.8 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR3675221 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR4818615 | Sensitive | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR18213713 | HR-TB | None | ERR4815604 | Other | None | SRR7496517 | Other | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
|---|
