Rv3245c - c.1452T>C


Drug resistance types
0 Sensitive 9 RR-TB 65 HR-TB 28 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 97 Other
lineage Counts
lineage Count
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 43
lineage2.1 3
M.canetti;lineage4.9 2
La1.6;La3;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 10
La1.7.1;La1.7.X-unk4 1
lineage4.1.2.1 6
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 1
lineage4.9;lineage6.3 4
La3;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.2.1 10
La1.7.1;lineage4.9 1
La2;lineage4.9 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage1.1.1 1
lineage2.1;lineage4.9 14
lineage4.1.3 2
lineage5.2 2
La1;lineage4.1.2 1
lineage1.2.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage3 3
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 2
13
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2 1
lineage1;lineage4.9 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.3.2.1 1
lineage2.2.1.2;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.3.3 1
lineage4.3.4.1 1
M.canetti;lineage2.1;lineage4.9 4
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8.1 1
M.canetti;lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3 1
La1.7;lineage4.2 1
lineage4.8;lineage4.9 2
M.canetti;lineage2.2 2
lineage4.2;lineage4.9 2
La3;lineage2.1;lineage6.3 1
La1.2.BCG 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.2.1 1
lineage6.1.1 2
lineage2.2.1.1 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.9;lineage9 2
lineage4.1;lineage4.8 1
La1.2;La1.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1 1
lineage4.3.2;lineage4.9 1
La3;lineage2 1
La1.8.1 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage1.1.2 1
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
La3;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 206
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6789621 Other lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR9786986 HR-TB lineage4.1.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6511621 HR-TB lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1184294 Other lineage4.9 None
ERR4831751 HR-TB lineage2.2.1 vn
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4797201 Other lineage1.2.2.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR4797588 MDR-TB lineage3 None
SRR12416840 MDR-TB lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11662690 HR-TB lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR1184372 MDR-TB None
ERR2514692 Other None
ERR987722 MDR-TB None
ERR4407463 HR-TB None
SRR1196583 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 HR-TB lineage3 None
ERR176651 Other lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1173355 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6866639 HR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR176778 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR5073931 HR-TB lineage2.2.1 vn
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR6045053 Other lineage4 None
SRR1184381 MDR-TB None
ERR9786604 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR9787197 Other None
SRR3675236 Other None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9787014 RR-TB lineage6.1.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR6046878 Other lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4831786 HR-TB lineage2.2.1 vn
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR181887 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR2027263 Other lineage4 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR3799304 RR-TB lineage6.1.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283032 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR3283042 HR-TB lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4769452 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR16278222 Other La1.8.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR9117709 Other None
ERR234659 HR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR21733183 RR-TB lineage1.1.2 None
ERR3797029 Other lineage4.9 None
ERR4797474 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR5341330 Other lineage4.9 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR16278238 Other La1.8.1 None
SRR18003019 Other lineage2.2.1 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None