Rv3246c - c.49_51delTTGinsCA


Drug resistance types
3 Sensitive 2 RR-TB 27 HR-TB 14 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 128 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9 14
lineage4.9;lineage6.3 6
lineage2.2.1 11
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage4 2
La3;lineage4.9 6
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 2
lineage2.1;lineage4.9;lineage6.3 10
lineage4.9 33
lineage4.1.2.1 8
lineage4.1.1.1 2
lineage4.3.2 1
lineage4.3.4.1 1
lineage1.1.1 1
lineage1.1.3.2 2
lineage4.8.1 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
La3 2
La3;lineage2.2.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
21
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage2.1 3
lineage4.1.3 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage5.2 2
lineage3.1.1 1
lineage4.3.3 1
lineage4.8 3
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.7 1
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
lineage2.2.1;lineage3 1
lineage4.2.2.2 1
lineage3.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
lineage3 2
La1.7;lineage4.2 1
La3;lineage4.8 1
lineage1.1.2 1
lineage6.3.1 1
lineage2.2.2 1
lineage2.2 1
spoligotype Counts
spoligotype Count
None 178
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6789621 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
SRR1172951 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR21690362 Other lineage1.1.1 None
ERR7821126 Other lineage1.1.3.2 None
SRR3675457 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR7821163 Other lineage2.2.1 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
ERR9786604 Other None
SRR6789626 Other None
ERR11252736 Other lineage4.9 None
SRR25827682 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR1196583 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR26399973 Other La3;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR6046066 Other lineage4.9 None
SRR1173706 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR26159043 Other lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4872094 MDR-TB lineage5.2 None
SRR1196474 Other lineage3.1.1 None
SRR6785263 Sensitive lineage2.2.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR11049020 Other lineage4.8 None
ERR9786694 Other lineage4.1.2.1 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
SRR12416840 MDR-TB lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496509 Other None
ERR4818615 Sensitive None
ERR9786671 Other None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR1184372 MDR-TB None
SRR7535086 Other None
ERR2514692 Other None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR9786515 Other lineage4.1.2.1 None
SRR3675549 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR702406 Other lineage2.1 None
SRR6045526 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR502912 Other lineage2.2.1 None
ERR2513470 Other lineage4.2.2.2 None
SRR1184346 HR-TB lineage3.1 None
ERR7821123 Other lineage1.1.3.2 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR1165628 Other La3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR1196546 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1173363 Other None
ERR4815604 Other None
ERR11252612 Other La3;lineage4.9 None
ERR9117709 Other None
ERR234659 HR-TB None
SRR18213713 HR-TB None
SRR28119805 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
ERR2514821 Other lineage2.2.1 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR4817735 Other lineage4.8 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR4816466 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR12268496 Sensitive lineage4.4.1.1 None