lineage | Count |
---|---|
lineage4.9 | 13 |
La3;lineage4.8 | 1 |
lineage6.3.1 | 1 |
lineage2.2.1 | 3 |
La3;lineage4.9 | 3 |
lineage2.2.1;lineage6.3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.2.1 | 3 |
La3 | 1 |
M.canetti;lineage2.1;lineage4.9 | 2 |
lineage2.1 | 1 |
La1.7;lineage4.2 | 1 |
lineage2.1;lineage4.9;lineage6.3 | 4 |
lineage2.1;lineage4.9 | 4 |
La3;lineage2.1;lineage4.9 | 3 |
lineage4.7 | 1 |
lineage2.1;lineage6.3 | 1 |
La3;lineage1.1.2 | 1 |
La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
lineage2.2.1;lineage3 | 1 |
lineage4 | 1 |
lineage4.1.1.1 | 1 |
lineage1.1.3.2 | 1 |
lineage4.8 | 1 |
M.canetti;lineage2.1;lineage6.3 | 1 |
5 | |
La3;lineage2.1;lineage6.3 | 1 |
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
La3;M.canetti;lineage2.2.1 | 1 |
lineage2.2 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4.1.3 | 1 |
lineage4.8.1 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675275 | Other | lineage4.9 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172234 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR28119805 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR1173355 | Other | lineage4.9 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR7821123 | Other | lineage1.1.3.2 | None | SRR1165699 | Other | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR2514692 | Other | None | SRR1172857 | Other | None | ERR9787197 | Other | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR1196677 | Other | lineage2.2 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | SRR26159043 | Other | lineage4.9 | None | SRR6785263 | Sensitive | lineage2.2.1 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR25827682 | Other | None |
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