Rv0407 - c.717G>C
Drug resistance types
40 Sensitive
2 RR-TB
82 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 4 |
| 90 | |
| lineage2 | 2 |
| lineage2.2.1 | 11 |
| lineage4 | 44 |
| lineage2.1 | 2 |
| lineage4.9 | 7 |
| lineage2.2.1.1 | 4 |
| lineage4.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 2 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.3 | 2 |
| La1.2 | 1 |
| La1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 186 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR20970016 | Other | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR3675502 | Other | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675236 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675311 | Other | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR4815552 | HR-TB | lineage2.2.1.1 | None | SRR3675510 | Other | None | SRR3675456 | HR-TB | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816466 | HR-TB | None | ERR212121 | HR-TB | None | SRR3742665 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4816656 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR1035162 | Other | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR5341453 | Sensitive | None | SRR5007188 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341456 | Other | None | SRR5341425 | Other | lineage4 | None | SRR5341418 | Other | None | SRR5341387 | Other | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045526 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045233 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045217 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | SRR6046225 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | SRR6046824 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6789626 | Other | None | ERR502889 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067681 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1034652 | Other | None | ERR3283027 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133986 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR137286 | Sensitive | lineage4 | None | ERR3439432 | Other | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797069 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR5336148 | Other | None | ERR3445504 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4798262 | HR-TB | La1 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798099 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736835 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR9786671 | Other | None | ERR751326 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR12142341 | HR-TB | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14801749 | Sensitive | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR15368973 | Other | None | SRR1791747 | Other | La1.8.1 | None |
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