lineage | Count |
---|---|
lineage3 | 3 |
35 | |
lineage2.2.1 | 7 |
lineage4.9 | 18 |
lineage5.2 | 2 |
lineage4.1.2.1 | 1 |
lineage4.6.2.2 | 2 |
lineage2.2 | 5 |
lineage3.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage1.2.2.2 | 1 |
lineage4.3.3 | 3 |
lineage4.3.2 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage2.2.2 | 1 |
lineage2 | 1 |
La3 | 1 |
lineage4 | 1 |
lineage1.2.1.2 | 1 |
lineage4.5 | 1 |
lineage4.3.4.1 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
lineage4.3 | 1 |
lineage4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 96 |
ID | Drug resistance | Lineage | Country iso2 | ERR4821053 | Other | lineage3 | None | ERR2693231 | Other | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6046644 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046514 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294248 | HR-TB | None | ERR323063 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR3797024 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797044 | Other | None | ERR6358991 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358837 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR702404 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR9896144 | Other | lineage3 | None | ERR9786843 | Other | None | ERR990545 | Other | lineage3 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR069989 | HR-TB | lineage2 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR12830406 | Sensitive | lineage4.3.3 | None | SRR13861224 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861333 | Sensitive | lineage4.9 | None | SRR13861528 | HR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861326 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861596 | Other | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR4814739 | MDR-TB | lineage2.2 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675234 | Other | None | SRR3675383 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR3675545 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None |
---|