Rv1484 - c.708G>A
Drug resistance types
10 Sensitive
2 RR-TB
21 HR-TB
10 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| 10 | |
| lineage5.2 | 2 |
| lineage4.9 | 28 |
| lineage2.2.1 | 4 |
| lineage2.1 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| lineage6.3.1 | 1 |
| lineage2.1;lineage4.9 | 6 |
| La3;lineage2.1;lineage4.9 | 2 |
| La3;lineage1.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.9;lineage7 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 6 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.7;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.2.2.2 | 1 |
| La3;lineage2.2.1 | 2 |
| lineage4.1.1.1 | 1 |
| La3 | 2 |
| lineage3.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.6.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1.1 | 1 |
| lineage3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 112 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1172857 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR1196768 | MDR-TB | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR1196494 | MDR-TB | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR6789626 | Other | None | SRR28119753 | Other | lineage4.9 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR7535086 | Other | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR702406 | Other | lineage2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1184372 | MDR-TB | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR1173363 | Other | None | SRR1173778 | Other | lineage4.9 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR1710057 | Other | lineage2.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR29093909 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR1165699 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR28119777 | Other | lineage4.9 | None | SRR1173400 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR1173633 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR1172951 | Other | lineage4.9 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR1173355 | Other | lineage4.9 | None | SRR1173218 | Other | lineage4.3.3 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4800341 | Other | lineage3 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR1172234 | Other | lineage4.9 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None |
|---|
