Rv3596c - c.477G>C
Drug resistance types
21 Sensitive
3 RR-TB
128 HR-TB
8 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| 120 | |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.2 | 7 |
| lineage2.2.1 | 12 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4 | 18 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.1 | 2 |
| lineage4.9 | 24 |
| La1.8.1 | 3 |
| lineage6.1.1 | 2 |
| lineage4;lineage3.1 | 1 |
| La1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage6.1.3 | 1 |
| lineage3 | 3 |
| lineage2.2.1.2 | 2 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 230 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323036 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | SRR6982365 | Other | lineage2.2.1 | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323053 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323041 | HR-TB | None | SRR7796666 | Pre-XDR-TB | lineage2.2.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323108 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR1063862 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034652 | Other | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR3283017 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR3797048 | HR-TB | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797044 | Other | None | ERR3797063 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR387051 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4769452 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769450 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR736839 | Other | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9786843 | Other | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9119669 | HR-TB | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR10808399 | Sensitive | lineage4 | None | ERR9896144 | Other | lineage3 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1174897 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861434 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR1640750 | HR-TB | None | SRR17658565 | Other | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR8692887 | Other | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692905 | HR-TB | None | SRR8692882 | HR-TB | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675455 | Sensitive | lineage4 | None | ERR176751 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675486 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675488 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675501 | HR-TB | None | SRR3675522 | Other | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | SRR3675558 | HR-TB | None | SRR3675545 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR2446563 | Other | lineage2.2.1 | nl | ERR4818607 | Sensitive | lineage4.9 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341456 | Other | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR5535933 | HR-TB | None | SRR6045526 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6046397 | Other | None | ERR278594 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | SRR6325444 | HR-TB | None | ERR4830353 | Other | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None |
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