Rv0529 - c.849A>G
Drug resistance types
58 Sensitive
6 RR-TB
173 HR-TB
22 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 4 |
| lineage4 | 65 |
| lineage4.9;La3 | 1 |
| lineage4.9 | 27 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| 173 | |
| lineage6.3;lineage2.2.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 22 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage2.2 | 5 |
| La1.8.1 | 4 |
| lineage4.1.1.2 | 1 |
| lineage3 | 3 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1 | 8 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.1 | 3 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 3 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| La1 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage2 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 2 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 366 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827687 | MDR-TB | lineage1.1.2 | None | ERR11068570 | Other | lineage4 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26159043 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675465 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815280 | Other | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675486 | HR-TB | None | ERR161033 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675221 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3675236 | HR-TB | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675234 | Other | None | SRR3675246 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675311 | Other | None | ERR181887 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | ERR4816999 | Other | None | SRR3675545 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR212001 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816656 | HR-TB | None | ERR3275196 | Other | lineage2.2.1 | nl | ERR4818021 | Other | La1.8.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4818394 | Other | lineage4.9 | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818615 | Other | None | ERR4818929 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341456 | Other | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341425 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341302 | HR-TB | None | SRR5341313 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341315 | Sensitive | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR278594 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045233 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046015 | Other | lineage4.9 | None | SRR6046046 | Other | None | SRR6046514 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | SRR6511621 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789626 | Other | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294248 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR502532 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR323036 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | SRR7496523 | Other | lineage4.7 | None | ERR11466174 | Other | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496509 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535086 | Other | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323045 | HR-TB | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323063 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1035122 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283021 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283053 | Other | lineage4.9 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3468544 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797044 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797060 | Other | La1.8.1 | None | ERR3797061 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797069 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4024991 | Other | None | ERR387051 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR4188350 | HR-TB | None | ERR4407463 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797474 | Other | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811142 | MDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811022 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR6866639 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736834 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119669 | HR-TB | None | ERR9786604 | Other | None | ERR9634265 | Sensitive | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR10808805 | Sensitive | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172234 | Other | None | SRR1173384 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173777 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175074 | MDR-TB | None | SRR1174897 | HR-TB | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12142341 | HR-TB | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1196546 | HR-TB | None | SRR13423544 | Other | lineage4.5 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861606 | Sensitive | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR25827682 | Other | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None |
|---|
