EBG00000313339 - n.1779C>T


Drug resistance types
18 Sensitive 1 RR-TB 60 HR-TB 16 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
lineage2.2.1 10
lineage2 2
lineage2.2 1
64
lineage4.3.3 4
lineage4.1.1.1 1
lineage4.8 6
lineage4.2;La1.7 1
lineage4.4.1.1 3
lineage4.1.1 1
lineage2.1 2
lineage6.3;lineage2.2.1 1
lineage4.3.4 1
lineage4.1.2.1 7
lineage4.9 22
lineage5.2 2
lineage4 7
lineage3.1.2.1 1
lineage4.1.1.3 2
lineage4.6.2.2 3
lineage3 2
La1 1
lineage3.1.2 1
lineage4.8;La3 1
lineage4.6.1.1 1
La1.2 1
lineage1.1.2 1
lineage4.1 1
lineage4.9.1 1
lineage4.3.4.2.1 1
lineage4.4.1.1.1 1
lineage6.3.1 1
lineage3.1 2
lineage4.3.4.1 1
lineage1.1.1 1
lineage2.2.1.1 1
spoligotype Counts
spoligotype Count
None 159
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11138607 Pre-XDR-TB lineage2.2.1 None
SRR20969677 HR-TB lineage2 None
SRR18910194 HR-TB lineage2.2 None
SRR19304036 HR-TB None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR22249687 Sensitive lineage4.8 None
SRR23961559 Other lineage4.2;La1.7 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR176793 Other lineage4.1.1 None
SRR3416776 Other lineage2.1 None
ERR181744 HR-TB None
ERR212034 HR-TB None
SRR3675574 HR-TB None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR176751 HR-TB None
ERR2229529 Sensitive lineage4.8 None
SRR3675555 HR-TB None
ERR212123 Other None
ERR212121 HR-TB None
SRR3742665 HR-TB None
SRR6045526 HR-TB None
ERR502912 Other lineage2.2.1 None
ERR4816760 Sensitive lineage4.1.2.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4819357 Other lineage4.9 None
ERR2514692 Other None
ERR245716 Sensitive lineage2.2.1 None
ERR1035138 MDR-TB None
SRR5341302 HR-TB None
SRR6046141 Other lineage4.9 None
ERR2660539 Other lineage4.9 None
SRR6045327 HR-TB None
SRR6045832 HR-TB lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045053 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046225 HR-TB None
ERR4872094 MDR-TB lineage5.2 None
SRR6046540 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6458423 HR-TB lineage2.2.1 None
ERR502908 HR-TB lineage2.2.1 None
SRR6964493 Sensitive lineage3.1.2.1 None
ERR11465025 Other lineage4.1.1.3 None
ERR11466174 Other lineage4.8 None
SRR7535086 Other None
ERR323043 HR-TB None
ERR3797043 HR-TB None
ERR1035157 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR108471 HR-TB lineage4 None
ERR3283058 Other lineage4.9 None
ERR4407463 HR-TB None
ERR3797036 HR-TB None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3804155 Other lineage4.1.2.1 None
ERR4407452 Sensitive lineage3 None
ERR387051 HR-TB None
ERR3994094 Sensitive lineage4.8 None
ERR4596910 Sensitive lineage4 None
ERR473367 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769452 HR-TB None
ERR4798262 HR-TB La1 None
ERR4769450 HR-TB None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4811142 MDR-TB None
ERR4810741 HR-TB None
ERR4811022 HR-TB None
ERR4811105 HR-TB None
ERR4800527 MDR-TB lineage2.2.1 None
ERR12015083 Other lineage4.8;La3 None
ERR6358755 Other lineage4.6.1.1 None
ERR12268496 Sensitive lineage4.4.1.1 None
ERR6198317 Other La1.2 None
ERR6358991 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6359045 HR-TB None
ERR6359070 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR702406 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9786440 Other lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR702404 HR-TB None
ERR245758 Other lineage4.9.1 None
ERR736867 HR-TB None
ERR736874 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786604 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR9786627 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
SRR1169194 Other None
ERR9787197 Other None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR9787139 Other lineage6.3.1 None
SRR1172728 MDR-TB None
SRR1172234 Other None
SRR1172844 MDR-TB lineage4.4.1.1 None
SRR1172817 HR-TB None
SRR1172857 MDR-TB None
SRR1173166 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
SRR1173118 Other None
SRR1172951 Other None
SRR1173153 HR-TB None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173400 Other None
SRR1173330 Pre-XDR-TB lineage4 None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173629 Other None
SRR1173562 HR-TB lineage4 None
SRR1173484 Other lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173788 Other None
SRR1173778 Other None
SRR1175052 HR-TB lineage4.9 None
SRR1175049 RR-TB None
SRR1175074 MDR-TB None
SRR1175090 Other lineage4.9 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR1184380 HR-TB None
SRR1184372 MDR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196474 HR-TB lineage3.1 None
SRR1196494 MDR-TB None
SRR1196566 HR-TB None
SRR1196546 HR-TB None
SRR12142341 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196768 MDR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR12416840 MDR-TB lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR13423649 Sensitive lineage2.2.1 None
SRR15368973 Other None
SRR13837613 Sensitive lineage4.9 None
SRR14066533 Sensitive lineage1.1.1 None
SRR1710057 Other lineage2.1 None
SRR15600376 HR-TB lineage2.2.1.1 None
SRR17658565 Other lineage3 None