Rv2428 - c.480G>A


Drug resistance types
43 Sensitive 13 RR-TB 31 HR-TB 90 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 88 Other
lineage Counts
lineage Count
M.canetti;lineage2.1;lineage4.9 25
lineage4.9 22
La3;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
M.canetti;lineage2.2 1
lineage4.6.1.1 1
lineage2.1 5
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage4.9 1
lineage1.1.2 45
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.9;lineage6.3 6
lineage2.2.2 2
lineage2.1;lineage4.9 17
lineage2.2.1 5
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 2
lineage1.1.2;lineage4 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
M.canetti;lineage2.1;lineage3 1
16
lineage1.1.2;lineage3.1.1 2
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage4.1.2.1 5
lineage4 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage4.3.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.3 2
lineage4.5 1
lineage4.1.2.1.1 1
lineage1.1.2;lineage4.3.4.1 1
lineage4.3.4.1 1
lineage1.1.2;lineage3.1.1;lineage4.3.4.2.1 1
lineage4.1.2 1
lineage1.1.2;lineage3.1.1;lineage4.6.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
La3;lineage2.1;lineage6.3 1
lineage3 2
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage4.7 1
La3;M.canetti;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.3.4.2.1 2
lineage1.1.2;lineage4.1.2.1 1
lineage1.1;lineage4 1
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.1.3 1
lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
lineage4.8.1 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage1.1.2;lineage3.1.1;lineage4.6.1.1 1
La3;lineage4.8 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 269
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675545 RR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR6358755 Other lineage4.6.1.1 None
SRR12142341 HR-TB lineage2.1 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12882740 Sensitive lineage1.1.2 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
ERR3077981 Sensitive lineage1.1.2 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR7362040 Sensitive lineage1.1.2 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR069989 HR-TB lineage2.2.2 None
ERR3039932 Sensitive lineage1.1.2 None
ERR4596937 Sensitive lineage1.1.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SAMN02381004 MDR-TB lineage1.1.2 ug
SRR12882499 Sensitive lineage1.1.2 None
ERR4815076 Sensitive lineage1.1.2 gb
SRR1165699 Other lineage4.9 None
SRR12882349 Sensitive lineage1.1.2 None
SRR12882760 Sensitive lineage1.1.2 None
ERR176654 Sensitive lineage1.1.2 mw
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR040121 MDR-TB lineage1.1.2 ug
SRR6044815 RR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR7362033 Sensitive lineage1.1.2 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR176631 Sensitive lineage1.1.2;lineage4 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12634610 Sensitive lineage1.1.2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815112 Sensitive lineage1.1.2 gb
ERR323046 Sensitive lineage1.1.2 mw
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR7902653 Sensitive lineage1.1.2 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
SRR3724957 HR-TB lineage1.1.2 None
ERR3077978 RR-TB lineage1.1 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR7362032 Sensitive lineage1.1.2 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4818615 Sensitive None
ERR11775908 Sensitive lineage1.1.2;lineage3.1.1 None
SRR1184372 MDR-TB None
SRR7535086 Other None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR1196768 MDR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1140718 MDR-TB lineage1.1.2 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4817692 MDR-TB lineage1.1.2;lineage4 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR7362031 Sensitive lineage1.1.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3077937 MDR-TB lineage1.1.2 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675561 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR176795 Sensitive lineage1.1.2 mw
SRR12882324 Sensitive lineage1.1.2 None
ERR11068555 Sensitive lineage4.1.2.1 None
SRR19428539 Sensitive lineage1.1.2;lineage3.1.1 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR1062894 MDR-TB lineage1.1.2 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR164019 Sensitive lineage1.1.2 mw
SRR6045219 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR12882123 Sensitive lineage1.1.2 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR176793 Other lineage4.1.1.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
ERR181951 Sensitive lineage1.1.2 mw
ERR176485 Sensitive lineage1.1.2 mw
SRR1184294 Other lineage4.9 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR13423544 Other lineage4.5 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR216976 Sensitive lineage1.1.2 None
ERR036233 Sensitive lineage1.1.2;lineage4.3.4.1 None
ERR4814352 Other lineage2.2.1 None
ERR7362038 Sensitive lineage1.1.2 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR19428517 Other lineage1.1.2;lineage3.1.1;lineage4.3.4.2.1 None
ERR4818347 Other lineage4.1.2 None
SRR1196546 Other lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR176618 Other lineage1.1.2 mw
ERR245742 Sensitive lineage1.1.2 mw
ERR4188350 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR19392994 Sensitive lineage1.1.2;lineage3.1.1;lineage4.6.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR7361996 Other lineage1.1.2 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1165667 Other lineage4.9;lineage6.3 None
SRR12882582 Sensitive lineage1.1.2 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR4596906 Sensitive lineage1.1.2 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1173363 Other None
ERR234659 HR-TB None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR181724 Sensitive lineage1.1.2 mw
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR4800341 HR-TB lineage3 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR19428533 HR-TB lineage1.1.2 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR4819932 Other lineage4.7 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None
ERR4821053 RR-TB lineage3 None
SRR1169194 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR176757 Sensitive lineage1.1.2 mw
SRR3675558 MDR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2513014 Other lineage1.1.2;lineage4.1.2.1 gb
SRR6045242 Other lineage2.1;lineage4.9 None
ERR4819322 Other lineage1.1;lineage4 None
SRR1173218 Other lineage4.3.3 None
SRR6045555 Other lineage4.9 None
ERR9786029 Sensitive lineage1.1.2 None
SRR1184312 Other lineage2.2.1 None
ERR5311089 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR12634569 Sensitive lineage1.1.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675248 Other lineage4.9 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816551 MDR-TB lineage4.1.1.3 None
ERR4820854 Other lineage4.1.2.1 None
SRR19415531 Sensitive lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1196566 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1172728 RR-TB La3 None
ERR163980 Sensitive lineage1.1.2 mw
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR3468607 RR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1172817 Other La3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR5311083 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675572 Other None
ERR11775900 Sensitive lineage1.1.2 None
SRR1184381 MDR-TB None
ERR4815604 Other None
ERR9117709 Other None
ERR11775911 MDR-TB lineage1.1.2 None
SRR3675236 Other None
SRR1196583 Other lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR19428519 Sensitive lineage1.1.2;lineage3.1.1;lineage4.6.1.1 None
ERR7902624 Other lineage1.1.2 None
ERR4817893 Other La3;lineage4.8 None
SRR069978 HR-TB lineage2.2.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1710057 Other lineage2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None