Rv3245c - c.-317A>G
Drug resistance types
10 Sensitive
39 RR-TB
95 HR-TB
89 MDR-TB
8 Pre-XDR-TB
4 XDR-TB
192 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 8 |
| lineage4.1.2.1 | 20 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage2.1;lineage4.9 | 18 |
| lineage4.3.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.9 | 98 |
| La3;lineage4.9 | 5 |
| lineage2.1;lineage4.9;lineage6.3 | 10 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La2;lineage4.9 | 2 |
| lineage4.3.3 | 2 |
| lineage4 | 6 |
| lineage2.2.1 | 19 |
| lineage4.1.3 | 2 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| M.canetti;lineage4.9 | 6 |
| lineage4.8.1 | 1 |
| lineage2.1 | 6 |
| lineage6.1.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 23 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage3 | 5 |
| lineage2.2.1.1 | 4 |
| La1.7;M.canetti;lineage4.9 | 5 |
| M.canetti;lineage2.2 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 8 |
| 21 | |
| lineage4.6.2.2 | 8 |
| lineage3.1;lineage9 | 1 |
| lineage4.8 | 6 |
| lineage2.1;lineage6.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage6.3.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.6.3;lineage4.9 | 3 |
| La1.6;La3;lineage4.9 | 1 |
| La1.8.1 | 3 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.2;La1.8.1 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| lineage1.2.1.2 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.5 | 2 |
| lineage4.1.2.1.1 | 1 |
| La1.7 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.1.2 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.1 | 1 |
| lineage5.2 | 2 |
| lineage4.2;lineage4.9 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1;lineage4 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9;lineage7 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.1 | 2 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| La3;lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage6.1.1 | 2 |
| La2;lineage2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 437 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR2229143 | RR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR5311102 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | ERR4188350 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4815752 | Other | lineage4.9 | None | SRR1172817 | Other | La3 | None | SRR6045952 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR5311090 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR6789626 | Other | None | ERR234659 | HR-TB | None | ERR2514692 | Other | None | SRR18213713 | HR-TB | None | SRR25827682 | Other | None | SRR7496517 | Other | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR4188342 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | ERR278594 | MDR-TB | lineage2.1;lineage4.9 | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR3675507 | RR-TB | lineage4.9 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675270 | Other | lineage4.9 | None | ERR5311081 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6045217 | Other | lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | ERR4819932 | Other | lineage4.7 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | SRR26159047 | RR-TB | lineage4.6.3;lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR3283044 | Other | lineage4 | None | SRR1791696 | RR-TB | La1.8.1 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR3675269 | RR-TB | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR5311089 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR6045526 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | SRR1173778 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR502912 | Other | lineage2.2.1 | None | SRR6045347 | Other | lineage4.9 | None | ERR176658 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR5311078 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR3283032 | Other | lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR5311082 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5917710 | RR-TB | lineage4.1.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR3675481 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR13861553 | RR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR2446566 | Other | lineage4.9 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1172951 | Other | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1165699 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR3468544 | RR-TB | lineage2.1;lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR8665994 | RR-TB | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR4812155 | Other | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4798139 | RR-TB | lineage1.1.2 | None | ERR11049020 | Other | lineage4.8 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR5311099 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786440 | Other | lineage4.1 | None | SRR3675457 | Other | lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1172234 | Other | lineage4.9 | None | SRR1180147 | RR-TB | lineage2.2.1.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR9786711 | Other | lineage4.6.2.2 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR3468607 | RR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2509673 | Other | lineage2.2.1 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675311 | Other | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR3675243 | MDR-TB | lineage4.9 | None | ERR5311083 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR1063896 | HR-TB | None | ERR9786671 | Other | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR9786604 | Other | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | ERR4407463 | HR-TB | None | ERR9787197 | Other | None | SRR3675236 | Other | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR12328189 | Sensitive | lineage2.2.1 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR3675275 | Other | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR4800341 | HR-TB | lineage3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR3675322 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR5311101 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675561 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR15600376 | HR-TB | lineage2.2.1.1 | None | SRR3675214 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4799025 | Other | lineage4.8 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR3797016 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR3797023 | MDR-TB | La1.8.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR386953 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR23961558 | RR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR4811030 | Other | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675248 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR176751 | HR-TB | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | ERR3801503 | Other | lineage4.6.2.2 | None | SRR5341453 | Other | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4816656 | Other | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR9119502 | MDR-TB | lineage4.6.2.2 | None | SRR1162864 | MDR-TB | lineage4.1.2.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR10808730 | Other | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | SRR22251329 | Other | lineage2.1 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | ERR3077978 | RR-TB | lineage1.1 | None | ERR3275196 | RR-TB | lineage2.2.1 | nl | ERR4819241 | Other | lineage4.9 | None | ERR473314 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR6359082 | Other | lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR926155 | Other | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR9786617 | Other | lineage4.1.1.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR5341456 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR3675383 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR3675572 | Other | None | ERR4815604 | Other | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR1640750 | RR-TB | None | ERR9117709 | Other | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR11252736 | Other | lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR176766 | MDR-TB | lineage2.1;lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4817893 | Other | La3;lineage4.8 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR3675549 | Other | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR2693239 | RR-TB | M.canetti;lineage2.1;lineage4 | None | SRR6785413 | Other | lineage2.2.1 | None | ERR4872096 | MDR-TB | lineage4.6.2.2 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR6046878 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4798504 | RR-TB | lineage3 | None | SRR1791747 | Other | La1.8.1 | None | ERR5311100 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR1196677 | Other | lineage2.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR6045555 | Other | lineage4.9 | None | SRR6045548 | Other | lineage4.9 | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9119138 | RR-TB | M.canetti;lineage4.3.1;lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | ERR4816551 | MDR-TB | lineage4.1.1.3 | None | SRR7496472 | Other | lineage4.9 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR3273109 | HR-TB | lineage4 | None |
|---|
