EBG00000313339 - n.1307T>A


Drug resistance types
8 Sensitive 3 RR-TB 26 HR-TB 15 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 85 Other
lineage Counts
lineage Count
12
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage4.9 25
lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.9;lineage6.3 5
lineage6.3.1 1
lineage2.1;lineage4.9;lineage6.3 6
lineage2.1;lineage4.9 5
lineage2.2.1 6
M.canetti;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage4.1;lineage4.8 2
lineage2.2.1;lineage6.3 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3;lineage4.9 2
lineage4.6.2.2 5
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage6.1.1 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.1.2.1 8
lineage4.2;lineage4.9 1
lineage3.1;lineage9 1
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2 2
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.3.4.2.1 2
lineage4.1.2.1.1 1
La3;lineage2.2.2 1
lineage4.1.1.1 3
La3;lineage2.2.1 1
lineage3 1
lineage4.3.4.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.1 2
La3;lineage4.8 1
lineage3.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.8 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La3;lineage2.1;lineage4.9 2
lineage3.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La3 2
lineage4.3.2.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
spoligotype Counts
spoligotype Count
None 141
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786604 Other None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR1196566 Other lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR11252736 Other lineage4.9 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
SRR1169194 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR28119753 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
SRR29017461 Other La3;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786843 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR9786671 Other None
SRR3675502 Sensitive lineage4.9 None
SRR1184372 MDR-TB None
SRR1173363 Other None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR9787014 Other lineage6.1.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1183049 RR-TB lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR1196677 Other lineage2.2 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR1181020 Other lineage2.2.1 None
SRR1196494 MDR-TB None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
SRR29093099 MDR-TB La3;lineage2.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR7535086 Other None
ERR990545 Other lineage3 None
SRR1165699 Other lineage4.9 None
SRR28119777 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR702406 Other lineage2.1 None
SRR28119827 Other La3;lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR28119752 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1184294 Other lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR176549 Other lineage4.3.4.2.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR1196583 Other lineage4.9 None
SRR28119823 Sensitive lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR29772570 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR9786384 Sensitive lineage4.1.2.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR11081257 Other lineage4.8 None
SRR13423649 Sensitive lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR29093909 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1172728 RR-TB La3 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR28119843 Sensitive lineage4.9 None
SRR29016780 Other lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None