Rv0668 - c.1428G>C
Drug resistance types
60 Sensitive
27 RR-TB
84 HR-TB
23 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| 46 | |
| lineage4 | 29 |
| lineage4.9 | 95 |
| lineage4.2.1 | 1 |
| lineage4.5 | 1 |
| lineage4.1 | 1 |
| lineage4.8 | 8 |
| lineage4.3.4.1 | 4 |
| La2 | 1 |
| La1.8.1 | 7 |
| lineage2.2.1 | 15 |
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.2.1 | 7 |
| lineage2.2.2 | 3 |
| lineage4.3.4.2.1 | 6 |
| La1 | 2 |
| lineage6.1.1 | 2 |
| lineage3 | 14 |
| lineage3.1.1 | 1 |
| La1.2 | 1 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 2 |
| lineage2 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| La1.7.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage1.1 | 1 |
| lineage2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 287 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045519 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045320 | Other | lineage4.9 | None | ERR4828628 | MDR-TB | lineage4.5 | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR294266 | HR-TB | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | ERR502524 | HR-TB | La2 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7585435 | Other | lineage4.9 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR067712 | HR-TB | lineage4 | None | DRR185024 | Other | lineage2.2.2 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283025 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797015 | HR-TB | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797019 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4188247 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769418 | Other | La1.2 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796577 | MDR-TB | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4798262 | HR-TB | La1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR5979407 | Other | lineage3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6866547 | Sensitive | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR702404 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736837 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR736839 | Other | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1172717 | Other | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140736 | RR-TB | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR14801749 | Sensitive | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR4815310 | Other | None | ERR4815471 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | ERR4816127 | Sensitive | lineage1.1 | None | ERR176740 | HR-TB | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816470 | Other | lineage3 | None | ERR4815815 | Sensitive | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR3275709 | HR-TB | lineage3 | nl | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818086 | Sensitive | lineage4.8 | None | ERR2432997 | Other | lineage4.8 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR2513259 | Other | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR4821143 | RR-TB | lineage4.9 | None |
|---|
