Rv0001 - c.882C>T


Drug resistance types
0 Sensitive 1 RR-TB 14 HR-TB 3 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 82 Other
lineage Counts
lineage Count
lineage6.1.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage2.2.1 7
lineage2.1;lineage4.9;lineage6.3 7
lineage4.9 9
La1.2.BCG;La1.8.1 1
lineage3.1;lineage9 1
lineage4.6.1.1 1
lineage2.1;lineage4.9 11
La3;lineage2.1;lineage4.9 2
lineage6.3.1 1
lineage1.1.2 1
lineage2.2 2
La3;lineage1.1.2 1
La3;lineage4.9 6
13
lineage4 1
lineage4.3.2 1
lineage3 2
lineage4.8 2
lineage4.9;lineage6.3 5
lineage2.1 2
lineage4.1.3 2
lineage2.1;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.2.1 6
lineage4.1;lineage4.8 1
lineage4.1.1.1 2
La3;lineage4.8 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.3.4.1 1
M.canetti;lineage2.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 1
spoligotype Counts
spoligotype Count
None 102
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9787165 Other lineage6.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1180137 Other lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173778 Other lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR1183049 RR-TB lineage2.2 None
SRR18003019 Other lineage2.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
ERR4816585 Other lineage2.2 None
SRR1169249 Other lineage4.9 None
ERR4815604 Other None
ERR2027263 Other lineage4 None
SRR1169306 Other La3;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR9117805 Other lineage4.3.2 None
ERR990545 Other lineage3 None
ERR11049020 Other lineage4.8 None
SRR7535086 Other None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR7496509 Other None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786843 Other None
SRR3675221 Other lineage4.9 None
ERR212033 Other lineage4.9 None
ERR9787197 Other None
SRR6789621 Other lineage4.9 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
ERR4819781 Other lineage2.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1181289 Other lineage2.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046066 Other lineage4.9 None
ERR4816999 Other None
SRR6789626 Other None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4800341 Other lineage3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR176643 Other La3;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117709 Other None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR11252612 Other La3;lineage4.9 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None