EBG00000313339 - n.329T>C


Drug resistance types
15 Sensitive 3 RR-TB 45 HR-TB 21 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 131 Other
lineage Counts
lineage Count
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.8 9
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 7
La3;lineage2.2.1 1
lineage2.1;lineage4.9 11
La1.7.X-unk4;lineage4.9 1
lineage2.2.1 12
M.canetti;lineage2.1;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.1.2.1 12
La2;lineage4.9 1
lineage2.2 1
M.canetti;lineage4.9 1
lineage3 3
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.9 43
lineage4.9;lineage9 1
16
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.2.2.2 2
lineage5.2 2
lineage2.2.1;lineage3 1
lineage2.1 3
La3 2
lineage4.3.4.1 2
lineage4.3.3 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7;lineage4.2 1
M.canetti;lineage4.2 1
La1.2.BCG 1
lineage2.2.2;lineage4 1
lineage1.1.2 1
lineage4.9;lineage6.3 9
lineage4.1.1.1 4
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage6.2.3 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2.1;lineage4.9 2
La1.6;La3;M.canetti;lineage4.2.2 1
lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.3.4.2.1 2
La3;lineage2.2.2 1
lineage2.2.1;lineage6.3 1
lineage3.1.1 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4 3
lineage4.1.3 2
lineage4.3.4.2 1
lineage4.6.2.2 1
lineage2.2.1.1 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.1 1
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage6.3.1 1
La3;lineage2 1
La3;lineage3 1
lineage2.2.2 1
La1.6;La3;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage4.1.1.3 2
lineage3.1.2 1
lineage4.3.2.1 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La3;lineage4.8 1
lineage4.8.1 1
La3;lineage4.9 1
lineage6.1.3 1
lineage3.1 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
spoligotype Counts
spoligotype Count
None 222
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR2517514 Sensitive lineage4.8 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
SRR1196677 Other lineage2.2 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6789626 Other None
ERR553132 MDR-TB lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR11466174 Other lineage4.8 None
ERR9786443 Sensitive lineage4.8 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
SRR25827856 MDR-TB lineage2.2.1;lineage3 None
SRR28119777 Other lineage4.9 None
ERR702406 Other lineage2.1 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR11466499 Other lineage4.3.4.1 None
SRR1172234 Other lineage4.9 None
SRR7496509 Other None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR1183111 HR-TB lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
SRR3675311 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1184381 MDR-TB None
SRR1172857 Other None
ERR9787197 Other None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR502908 HR-TB lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
SRR3675502 Sensitive lineage4.9 None
SRR28044844 Sensitive lineage1.1.2 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR3275201 Sensitive lineage4.8 nl
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR21732980 Other lineage4.3.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR4819241 Other lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
ERR9787061 Sensitive lineage6.2.3 None
SRR1172310 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR2693257 Other La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR3797069 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1173384 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786515 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6785263 Sensitive lineage2.2.1 None
ERR4796584 Sensitive lineage1.2.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR11081258 Other lineage4.8 None
ERR4800341 Other lineage3 None
ERR4816478 HR-TB lineage4 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR11641184 Pre-XDR-TB lineage4.3.4.2 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR14066533 Sensitive lineage1.1.1 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
SRR1173118 Other lineage2.2.1 None
SRR28044634 Other lineage3 None
ERR234659 Other None
SRR21690574 Other lineage4.1.2.1 None
ERR176549 Other lineage4.3.4.2.1 None
ERR9786421 Other lineage4.1.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR1184372 MDR-TB None
SRR1173363 Other None
SRR3675572 Other None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1196566 Other lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1173788 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
SRR18003019 Other lineage2.2.1 None
SRR1173355 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR7496517 Other None
ERR4820773 HR-TB lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR11465025 Other lineage4.1.1.3 None
ERR4819877 HR-TB lineage4.9 None
ERR11049020 Other lineage4.8 None
ERR4817731 HR-TB lineage4.9 None
ERR2446570 Sensitive lineage4.8 nl
ERR4796511 HR-TB lineage3.1.2 in
ERR8975532 HR-TB lineage4.3.2.1 None
SRR1181091 Other lineage2.2.1.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1023509 Other lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR13837915 Sensitive lineage4.9 None
ERR176751 Other lineage4.9 None
ERR12015083 Other La3;lineage4.8 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR29017461 Other La3;lineage4.9 None
ERR9787153 Other lineage6.1.3 None
SRR1184346 HR-TB lineage3.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR502912 Other lineage2.2.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR28351341 Other lineage4.1.1.1 None
ERR987722 MDR-TB None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR245716 Sensitive lineage2.2.1 None
SRR1173153 Other lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR11465024 Other lineage4.1.1.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4819422 HR-TB lineage4.9 None
SRR6785227 Other lineage2.2.1 None
SRR1173633 Other lineage4.9 None
ERR9786440 Other lineage4.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR3675232 Other lineage4.1.2.1 None
SRR1173778 Other lineage4.9 None
ERR9786569 Other lineage4.8 None
SRR22249687 Sensitive lineage4.8 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR29097026 Other lineage4.9 None