EBG00000313325 - n.455C>T
Drug resistance types
4 Sensitive
0 RR-TB
24 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
44 Other
lineage Counts
| lineage | Count |
|---|---|
| 30 | |
| lineage4.9 | 8 |
| lineage4 | 5 |
| lineage2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 4 |
| lineage4.1.3 | 2 |
| lineage4.8 | 3 |
| lineage4.1.2.1 | 5 |
| lineage4.3.4.2.1 | 2 |
| lineage5.2 | 2 |
| lineage1.1.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.7 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage2.2.1;La3 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage3;lineage2.2.1 | 1 |
| lineage4.9;La1 | 1 |
| La1.2 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage2.2.1 | 4 |
| lineage3.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.4.1.1;lineage1.2.2.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 91 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283027 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797069 | Other | None | ERR3797058 | Other | lineage4.9 | None | ERR5336148 | Other | None | ERR4596910 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4800341 | Other | lineage3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR7361941 | Sensitive | lineage4.3.4.2.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416824 | HR-TB | None | SRR15014623 | MDR-TB | lineage4.7 | None | SRR15014716 | MDR-TB | lineage4.7 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR19303884 | HR-TB | None | SRR25827682 | Other | None | ERR11068570 | Other | lineage4 | None | ERR11081864 | Other | lineage3 | None | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR25827605 | Pre-XDR-TB | lineage4;lineage3;lineage2.2.1 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR23961549 | Other | La1.2 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | SRR3675311 | Other | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4815752 | Other | lineage4.9 | None | SRR3675509 | Other | lineage4.9 | None | ERR2229542 | Other | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | SRR6045638 | Other | lineage3.1.2 | None | ERR4816585 | Other | lineage2.2 | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | SRR5007188 | Other | lineage4 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | SRR7496472 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341333 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6044855 | Other | lineage4.9 | None | ERR1213930 | Other | lineage4.3.2 | pe | SRR6044780 | Other | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | SRR6046540 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR11465711 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | SRR7496517 | Other | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR027293 | Other | None | ERR11049020 | Other | lineage4.8 | None | ERR10796627 | Other | lineage4 | None | ERR123944 | Sensitive | lineage4.1 | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None |
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