Rv3596c - c.1374C>G
Drug resistance types
28 Sensitive
2 RR-TB
78 HR-TB
20 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
111 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 2 |
| lineage4.1.2.1 | 11 |
| 107 | |
| lineage4.1.1.3 | 2 |
| lineage4 | 22 |
| lineage4.9 | 35 |
| lineage2 | 3 |
| lineage4.1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage3 | 3 |
| lineage4.8;La3 | 2 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage1.1.2 | 2 |
| lineage5.2 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.8 | 4 |
| lineage4.1.1 | 2 |
| lineage4.1 | 2 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| lineage2.2.1 | 9 |
| lineage4.3.4.1 | 1 |
| lineage2.2 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;La1 | 1 |
| La1.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.3 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 1 |
| lineage4;lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 246 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7496523 | Other | lineage4.7 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR502532 | HR-TB | None | ERR502943 | HR-TB | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR323043 | HR-TB | None | SRR7535086 | Other | None | ERR067699 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR133825 | Sensitive | lineage4 | None | ERR3283043 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283027 | HR-TB | None | ERR3797017 | Other | None | ERR3797058 | Other | lineage4.9 | None | ERR3797069 | Other | None | ERR3797061 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4800341 | Other | lineage3 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4811022 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4810741 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR702404 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR6358991 | HR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR736835 | HR-TB | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786440 | Other | lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786843 | Other | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787165 | Other | lineage6 | None | ERR9787197 | Other | None | SRR1172728 | MDR-TB | None | SRR1169194 | Other | None | SRR1169227 | MDR-TB | lineage3.1.1 | None | SRR1172234 | Other | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184380 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837800 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR25827682 | Other | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR11068570 | Other | lineage4 | None | ERR11081257 | Other | lineage4.8 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159043 | Other | lineage4.9 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR176751 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675221 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675234 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR2229542 | Other | lineage4.8 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816999 | Other | None | SRR3675547 | Other | lineage4.9 | None | ERR212001 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR4817037 | Other | lineage4.9 | None | ERR212034 | HR-TB | None | ERR212033 | HR-TB | None | ERR212121 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212123 | Other | None | SRR3675572 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4817735 | Other | lineage4.8 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR234659 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818615 | Other | None | SRR5341396 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2514821 | Other | lineage2.2.1 | None | SRR5341333 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341315 | Sensitive | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR5341323 | Sensitive | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693231 | Other | None | SRR6045526 | HR-TB | None | ERR2693230 | Other | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6789626 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831638 | Sensitive | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR11465665 | Other | lineage4.1.1.3 | None |
|---|
