Rv1173 - c.1995G>C
Drug resistance types
16 Sensitive
0 RR-TB
100 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 9 |
| lineage4.1.1 | 1 |
| 100 | |
| lineage4 | 16 |
| lineage4.9 | 14 |
| lineage4.1.2.1 | 6 |
| lineage2.2 | 5 |
| lineage5.2 | 2 |
| lineage1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| La1 | 1 |
| La1.8.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4;lineage3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage3 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| La3 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 179 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3275196 | Other | lineage2.2.1 | nl | ERR2509673 | Other | lineage2.2.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818929 | HR-TB | None | ERR2514692 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR1035138 | MDR-TB | None | SRR5341299 | Sensitive | lineage4 | None | ERR2693231 | Other | None | ERR2514821 | Other | lineage2.2.1 | None | ERR2515228 | Other | lineage2.2.1 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR2693254 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045327 | HR-TB | None | ERR278594 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR2693257 | Other | None | SRR6045526 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046015 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | SRR6896601 | Sensitive | lineage4.3.4.2.1 | None | SRR6982365 | Other | lineage2.2.1 | None | ERR502889 | Other | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR1034634 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR067681 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063857 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283028 | Other | None | ERR3283014 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797061 | Other | None | ERR3797048 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR403298 | HR-TB | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR405209 | Sensitive | lineage4 | None | ERR4188350 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4798099 | Other | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR702404 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736848 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9896144 | Other | lineage3 | None | ERR9786843 | Other | None | SRR069981 | HR-TB | lineage2.2.2 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1183049 | Other | lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837849 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR176568 | Other | lineage4.3 | None | SRR6325445 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR181744 | HR-TB | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1035239 | HR-TB | None | SRR3675234 | Other | None | ERR176643 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR212033 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675502 | Other | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212123 | Other | None | SRR3675558 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None |
|---|
