Rv3245c - c.456C>T


Drug resistance types
4 Sensitive 4 RR-TB 23 HR-TB 25 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 46 Other
lineage Counts
lineage Count
8
lineage1.2.2.2 23
La3;lineage2.1;lineage6.3 1
lineage4.9 11
M.canetti;lineage4.9 2
lineage2.1;lineage4.9 8
La3;lineage4.8 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.1 3
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
lineage1.2.2.1;lineage4.4.1.1 1
lineage4.1.2.1 4
La3;lineage2 1
lineage2.1;lineage4.9;lineage6.3 8
La1.2.BCG 1
La3;M.canetti;lineage2.2.1 1
M.canetti;lineage2.1;lineage4.9 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
lineage2.2.1 3
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.1;lineage4.3.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage1.2.2.2;lineage4.3.4.2.1 1
lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
lineage2.1;lineage6.3 1
La3;lineage1.1.2 1
lineage1.1.2;lineage1.2.2.2 1
lineage4.4.1.1 1
La3 1
lineage4.2;lineage4.6.3;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 104
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675572 Other None
ERR9786671 Other None
ERR9786604 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR11466551 Sensitive lineage1.2.2.2 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675441 RR-TB lineage4.9 None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR245670 MDR-TB lineage1.2.2.2 mw
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675214 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4818394 Sensitive lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11252519 Sensitive lineage1.2.2.2 None
ERR234659 HR-TB None
ERR4798262 HR-TB La1.2.BCG None
ERR212054 MDR-TB lineage1.2.2.2 mw
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR221596 MDR-TB lineage1.2.2.2 mw
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR6045555 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR502912 Other lineage2.2.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR4820854 Other lineage4.1.2.1 None
ERR7821093 Sensitive lineage1.2.2.2 None
ERR163962 MDR-TB lineage1.2.2.2 mw
SRR6046540 Other lineage2.1;lineage4.9 None
SRR19428621 MDR-TB lineage1.2.2.2 None
SRR1184294 Other lineage4.9 None
ERR1063861 MDR-TB lineage1.2.2.2 None
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR126605 MDR-TB lineage1.2.2.2 mw
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR164021 MDR-TB lineage1.2.2.2;lineage4.3.4.2.1 mw
ERR245829 MDR-TB lineage1.2.2.2 mw
ERR245651 MDR-TB lineage1.2.2.2 mw
SRR7535086 Other None
ERR773802 MDR-TB lineage1.2.2.2 None
ERR11488696 MDR-TB lineage1.2.2.2 None
ERR181933 MDR-TB lineage1.2.2.2 mw
SRR3675524 Other lineage4.9;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR181793 MDR-TB lineage1.2.2.2 mw
ERR779679 MDR-TB lineage1.2.2.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR163947 MDR-TB lineage1.1.2;lineage1.2.2.2 mw
ERR736807 MDR-TB lineage1.2.2.2 None
ERR161085 MDR-TB lineage1.2.2.2 mw
ERR181930 MDR-TB lineage1.2.2.2 mw
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045219 HR-TB lineage4.9 None
ERR245836 MDR-TB lineage1.2.2.2 mw
SRR7496472 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR7902711 HR-TB lineage1.2.2.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None