Rv0006 - c.-353A>G
Drug resistance types
54 Sensitive
3 RR-TB
172 HR-TB
17 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
116 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 5 |
| lineage4.1 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.1.1 | 3 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage2.2.1 | 13 |
| 173 | |
| lineage4.8 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9 | 36 |
| lineage4 | 62 |
| lineage4.3 | 1 |
| lineage2.2 | 7 |
| lineage3 | 4 |
| lineage4.1.2.1 | 11 |
| La1.8.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.7 | 2 |
| lineage4.2.1 | 1 |
| lineage4.6.2.2 | 5 |
| lineage1.1 | 1 |
| lineage5.2 | 2 |
| lineage3.1 | 3 |
| La2 | 1 |
| lineage4.1.3 | 2 |
| La1 | 1 |
| lineage2 | 3 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage6.1.3 | 1 |
| lineage6 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 370 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR21732980 | Other | lineage4.3.3 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR176793 | Other | lineage4.1.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR2229084 | Sensitive | lineage4.8 | dk | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675221 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675234 | Other | None | ERR181824 | HR-TB | lineage4 | None | SRR3675311 | Other | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4816999 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | ERR4816964 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | ERR212001 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR4817060 | RR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3675558 | HR-TB | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3742665 | HR-TB | None | SRR3675572 | Other | None | ERR4816470 | Other | lineage3 | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4816656 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4818929 | HR-TB | None | ERR4818394 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5007188 | Other | lineage4 | None | ERR1023322 | Sensitive | lineage4 | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4819524 | Other | lineage3 | None | SRR5341302 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR1035138 | MDR-TB | None | ERR4819932 | Other | lineage4.7 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2693231 | Other | None | ERR2693230 | Other | None | ERR2693239 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR2693254 | Other | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR278594 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6046152 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044790 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046299 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046362 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325442 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | SRR6789626 | Other | None | ERR502943 | HR-TB | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323055 | HR-TB | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR7535086 | Other | None | SRR7496517 | Other | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1034634 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None | ERR323107 | Other | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR3283021 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283024 | Other | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797014 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797069 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4188247 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4407463 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4798262 | HR-TB | La1 | None | ERR4769521 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4810741 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6358837 | HR-TB | None | ERR4811493 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6358991 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359045 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR702406 | HR-TB | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR8976043 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9117709 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9119669 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786604 | Other | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786843 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787165 | Other | lineage6 | None | ERR9787139 | Other | lineage6.3.1 | None | SRR10808805 | Sensitive | None | ERR9787197 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172234 | Other | None | SRR1169306 | Other | None | SRR1172728 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1172817 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1175090 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175074 | MDR-TB | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175513 | Other | lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR20969677 | HR-TB | lineage2 | None | SRR15368973 | Other | None | SRR16157123 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR17658572 | Sensitive | lineage1.1.2 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19304036 | HR-TB | None |
|---|
