SRR3675311
|
Other
|
|
None
|
ERR176651
|
HR-TB
|
|
None
|
ERR181887
|
HR-TB
|
|
None
|
SRR3675312
|
HR-TB
|
lineage4
|
None
|
SRR3675383
|
HR-TB
|
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675510
|
Other
|
|
None
|
ERR4816100
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
ERR4816999
|
Other
|
|
None
|
SRR3675545
|
HR-TB
|
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR3675574
|
HR-TB
|
|
None
|
ERR212034
|
HR-TB
|
|
None
|
ERR4817060
|
RR-TB
|
|
None
|
SRR3675558
|
HR-TB
|
|
None
|
ERR212123
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
ERR212125
|
HR-TB
|
lineage4
|
None
|
ERR212138
|
HR-TB
|
lineage4
|
None
|
ERR4816470
|
Other
|
lineage3
|
None
|
SRR3742665
|
HR-TB
|
|
None
|
ERR4816559
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR3675571
|
HR-TB
|
|
None
|
ERR4816550
|
Sensitive
|
lineage4.9
|
None
|
ERR4816551
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR553132
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
ERR3275215
|
Other
|
lineage4.1.2.1
|
nl
|
ERR4817735
|
Other
|
lineage4.8
|
None
|
ERR4816656
|
HR-TB
|
|
None
|
ERR502912
|
Other
|
lineage2.2.1
|
None
|
ERR4817692
|
HR-TB
|
lineage4;lineage1.1.2
|
None
|
ERR4817893
|
Other
|
lineage4.8;La3
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR4818347
|
Other
|
lineage4.1.2
|
None
|
SRR7496472
|
Other
|
|
None
|
ERR234659
|
HR-TB
|
|
None
|
ERR2229143
|
Other
|
lineage4.1.1
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4818021
|
Other
|
La1.8.1
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR4818394
|
Other
|
lineage4.9
|
None
|
SRR5007188
|
Other
|
lineage4
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
ERR2509673
|
Other
|
lineage2.2.1
|
None
|
ERR4818607
|
Sensitive
|
lineage4.9
|
None
|
ERR4818929
|
HR-TB
|
|
None
|
ERR4818615
|
Other
|
|
None
|
ERR4820854
|
Other
|
lineage4.1.2.1
|
None
|
ERR2514390
|
Sensitive
|
lineage4.9;lineage3.1.2.1
|
None
|
ERR2514327
|
HR-TB
|
lineage4.8
|
None
|
ERR4819322
|
Other
|
lineage4;lineage1.1
|
None
|
ERR4820335
|
Other
|
lineage4.1.2.1
|
None
|
SAMN02414850
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR5341302
|
HR-TB
|
|
None
|
ERR2514692
|
Other
|
|
None
|
SRR5341332
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR2514821
|
Other
|
lineage2.2.1
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
ERR2693239
|
HR-TB
|
|
None
|
ERR2446563
|
Other
|
lineage2.2.1
|
nl
|
SRR5341333
|
HR-TB
|
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4821053
|
Other
|
lineage3
|
None
|
SRR6046133
|
HR-TB
|
|
None
|
SRR6045503
|
HR-TB
|
|
None
|
SRR5535933
|
HR-TB
|
|
None
|
ERR4822101
|
Sensitive
|
lineage4.1.3;lineage1.1.2
|
None
|
ERR4821578
|
Other
|
lineage4.1.2.1
|
None
|
SRR6045526
|
HR-TB
|
|
None
|
ERR278594
|
HR-TB
|
|
None
|
ERR2446118
|
Other
|
lineage4.1.2.1
|
nl
|
SRR6045555
|
HR-TB
|
|
None
|
SRR6044790
|
HR-TB
|
|
None
|
SRR6044855
|
Other
|
lineage4.9
|
None
|
SRR6325442
|
HR-TB
|
|
None
|
SRR6046015
|
Other
|
lineage4.9
|
None
|
SRR6045327
|
HR-TB
|
|
None
|
SRR6045952
|
HR-TB
|
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
SRR6046066
|
HR-TB
|
|
None
|
SRR6046521
|
Other
|
lineage4.4.1.1
|
None
|
SRR6046225
|
HR-TB
|
|
None
|
SRR6046305
|
Other
|
lineage4.9
|
None
|
SRR6325444
|
HR-TB
|
|
None
|
ERR2517489
|
Sensitive
|
lineage4.1.2.1
|
nl
|
SRR6046514
|
HR-TB
|
|
None
|
SRR6325448
|
HR-TB
|
|
None
|
SRR6325447
|
HR-TB
|
|
None
|
SRR6046540
|
HR-TB
|
|
None
|
SRR6046594
|
HR-TB
|
lineage4
|
None
|
SRR6785263
|
Sensitive
|
lineage2.2.1
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6397654
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR3077978
|
Other
|
lineage1.1
|
None
|
ERR4872094
|
MDR-TB
|
lineage5.2
|
None
|
ERR294248
|
HR-TB
|
|
None
|
SRR6789626
|
Other
|
|
None
|
SRR6785267
|
Other
|
lineage2.2.1
|
None
|
ERR323036
|
HR-TB
|
|
None
|
ERR323034
|
HR-TB
|
lineage3.1
|
None
|
ERR5311090
|
HR-TB
|
|
None
|
ERR502532
|
HR-TB
|
|
None
|
ERR5311099
|
HR-TB
|
|
None
|
ERR502908
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5311081
|
HR-TB
|
|
None
|
ERR323041
|
HR-TB
|
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR323038
|
HR-TB
|
|
None
|
SRR7496509
|
Other
|
|
None
|
SRR7496517
|
Other
|
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR7585435
|
Other
|
lineage4.9
|
None
|
ERR323063
|
HR-TB
|
|
None
|
SRR7796666
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR323055
|
HR-TB
|
|
None
|
ERR323043
|
HR-TB
|
|
None
|
ERR323045
|
HR-TB
|
|
None
|
ERR323054
|
HR-TB
|
lineage3.1
|
None
|
ERR323108
|
HR-TB
|
lineage4
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
ERR1023302
|
MDR-TB
|
lineage3;La3
|
None
|
ERR1023295
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR1063857
|
HR-TB
|
|
None
|
ERR1023525
|
HR-TB
|
lineage4
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
ERR1063839
|
HR-TB
|
lineage2.2
|
None
|
ERR1035157
|
Other
|
lineage4.9
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
ERR1063862
|
HR-TB
|
|
None
|
ERR1063858
|
HR-TB
|
|
None
|
ERR1063859
|
HR-TB
|
|
None
|
ERR10796631
|
Other
|
lineage4.3.4
|
None
|
ERR3283010
|
Other
|
La1
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR12015084
|
Other
|
lineage4.8
|
None
|
ERR3283017
|
HR-TB
|
|
None
|
ERR3283013
|
MDR-TB
|
lineage4
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR3283025
|
HR-TB
|
|
None
|
ERR3283031
|
HR-TB
|
|
None
|
ERR3283027
|
HR-TB
|
|
None
|
ERR3283040
|
HR-TB
|
|
None
|
ERR3283051
|
Other
|
lineage4.9
|
None
|
ERR3283048
|
HR-TB
|
lineage4.9
|
None
|
ERR3283036
|
HR-TB
|
|
None
|
ERR3445503
|
HR-TB
|
|
None
|
ERR3283047
|
HR-TB
|
|
None
|
ERR3283057
|
HR-TB
|
lineage4
|
None
|
ERR3468544
|
HR-TB
|
|
None
|
ERR3797048
|
HR-TB
|
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR3797016
|
HR-TB
|
|
None
|
ERR3797015
|
HR-TB
|
|
None
|
ERR3797036
|
HR-TB
|
|
None
|
ERR3797063
|
HR-TB
|
|
None
|
ERR3797071
|
Other
|
lineage4.9
|
None
|
ERR3797069
|
Other
|
|
None
|
ERR4188247
|
HR-TB
|
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797083
|
HR-TB
|
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR4188350
|
HR-TB
|
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4596910
|
Sensitive
|
lineage4
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR4769521
|
HR-TB
|
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR12015085
|
Other
|
lineage4.8
|
None
|
ERR12015083
|
Other
|
lineage4.8;La3
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR473332
|
Other
|
lineage4
|
None
|
ERR4769474
|
HR-TB
|
lineage4
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4810741
|
HR-TB
|
|
None
|
ERR4810624
|
HR-TB
|
lineage2.2
|
None
|
ERR4811022
|
HR-TB
|
|
None
|
ERR6358837
|
HR-TB
|
|
None
|
ERR4811105
|
HR-TB
|
|
None
|
ERR4811142
|
MDR-TB
|
|
None
|
ERR5336148
|
Other
|
|
None
|
ERR5917710
|
Other
|
lineage4.1.2.1
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR6359045
|
HR-TB
|
|
None
|
ERR702406
|
HR-TB
|
|
None
|
ERR6866807
|
HR-TB
|
lineage4
|
None
|
ERR702404
|
HR-TB
|
|
None
|
ERR736856
|
HR-TB
|
lineage4
|
None
|
ERR245758
|
Other
|
lineage4.9.1
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR736839
|
Other
|
|
None
|
ERR736867
|
HR-TB
|
|
None
|
ERR736875
|
HR-TB
|
lineage4
|
None
|
ERR772255
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR760733
|
MDR-TB
|
lineage4.1.2.1.1
|
None
|
ERR736874
|
HR-TB
|
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
ERR8976043
|
HR-TB
|
|
None
|
ERR9117721
|
HR-TB
|
lineage1.1.2
|
None
|
ERR9117709
|
HR-TB
|
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR9119500
|
MDR-TB
|
lineage5.2
|
None
|
ERR9119669
|
HR-TB
|
|
None
|
ERR9786515
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9786444
|
Sensitive
|
lineage4.8
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR9786617
|
Other
|
lineage4.1.1
|
None
|
ERR9786604
|
Other
|
|
None
|
ERR9786986
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR9786671
|
Other
|
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
SRR069989
|
HR-TB
|
lineage2
|
None
|
ERR9787165
|
Other
|
lineage6
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR069978
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR1162864
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1162740
|
Other
|
lineage4.1.2.1
|
None
|
SRR1165423
|
Other
|
lineage4.1.2.1
|
None
|
SRR1163221
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1167055
|
Other
|
lineage4.1.2.1
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
SRR1166821
|
HR-TB
|
lineage4.1.2.1
|
None
|
SRR1169194
|
Other
|
|
None
|
SRR1172817
|
HR-TB
|
|
None
|
SRR1172234
|
Other
|
|
None
|
SRR1172728
|
MDR-TB
|
|
None
|
SRR1172844
|
MDR-TB
|
lineage4.4.1.1
|
None
|
SRR1173118
|
Other
|
|
None
|
SRR1172857
|
MDR-TB
|
|
None
|
SRR1172951
|
Other
|
|
None
|
SRR1173384
|
Other
|
lineage4
|
None
|
SRR1173153
|
HR-TB
|
|
None
|
SRR1173166
|
Other
|
lineage4.9
|
None
|
SRR1173218
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1173363
|
HR-TB
|
|
None
|
SRR1173453
|
Other
|
lineage4.4.1.1
|
None
|
SRR1173400
|
Other
|
|
None
|
SRR1173562
|
HR-TB
|
lineage4
|
None
|
SRR1173706
|
Other
|
lineage4.9
|
None
|
SRR1173633
|
HR-TB
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
|
None
|
SRR1173778
|
Other
|
|
None
|
SRR1173767
|
HR-TB
|
lineage4.4.1.1
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
SRR1173788
|
Other
|
|
None
|
SRR1175049
|
RR-TB
|
|
None
|
SRR1175074
|
MDR-TB
|
|
None
|
SRR1175090
|
Other
|
lineage4.9
|
None
|
SRR1184294
|
HR-TB
|
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1184312
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1184380
|
HR-TB
|
|
None
|
SRR1184388
|
Other
|
|
None
|
SRR1196474
|
HR-TB
|
lineage3.1
|
None
|
SRR1196494
|
MDR-TB
|
|
None
|
SRR1196566
|
HR-TB
|
|
None
|
SRR1196571
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1196677
|
HR-TB
|
lineage2
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
SRR12142341
|
HR-TB
|
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1196546
|
HR-TB
|
|
None
|
SRR12416824
|
HR-TB
|
|
None
|
SRR13861332
|
Other
|
lineage4.9
|
None
|
SRR13837426
|
Other
|
lineage4.9
|
None
|
SRR13861146
|
Sensitive
|
lineage4.9
|
None
|
SRR13861261
|
Sensitive
|
lineage4.9
|
None
|
SRR13861302
|
Sensitive
|
lineage4.9
|
None
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR13861224
|
Sensitive
|
lineage4.9
|
None
|
SRR13861304
|
Other
|
lineage4.9
|
None
|
SRR13861322
|
Other
|
lineage4.9
|
None
|
SRR15368973
|
Other
|
|
None
|
SRR13861372
|
Other
|
lineage4.9
|
None
|
SRR13861447
|
RR-TB
|
lineage4.9
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
SRR13861629
|
RR-TB
|
lineage4.9
|
None
|
SRR1510066
|
Other
|
lineage1.2.1.2.1
|
None
|
SRR13861386
|
HR-TB
|
lineage4.9
|
None
|
SRR13861428
|
Other
|
lineage4.9
|
None
|
SRR13861434
|
RR-TB
|
lineage4.9
|
None
|
SRR13861646
|
Other
|
lineage4.9
|
None
|
SRR25827687
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
SRR1640750
|
HR-TB
|
|
None
|
SRR1791696
|
Other
|
La1.8.1
|
None
|
SRR17658565
|
Other
|
lineage3
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR20969677
|
HR-TB
|
lineage2
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2
|
None
|
SRR19303884
|
HR-TB
|
|
None
|
SRR20632814
|
Sensitive
|
lineage4
|
None
|
SRR18213713
|
HR-TB
|
lineage4.5
|
None
|
SRR19304036
|
HR-TB
|
|
None
|
SRR26399239
|
Sensitive
|
lineage4.9
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
SRR5709967
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11068570
|
Other
|
lineage4
|
None
|
SRR26937071
|
MDR-TB
|
lineage2.2.1;La3
|
None
|
SRR23961558
|
Other
|
lineage6.3;lineage4.9;lineage2.1
|
None
|
SRR26399973
|
Other
|
lineage4.9;La3
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR23961559
|
Other
|
lineage4.2;La1.7
|
None
|
SRR28119811
|
Other
|
lineage6.3;lineage2.2.1
|
None
|
SRR25827497
|
Pre-XDR-TB
|
lineage3;lineage2.2.1
|
None
|
ERR4815604
|
HR-TB
|
|
None
|
ERR176778
|
HR-TB
|
|
None
|
SRR3675464
|
HR-TB
|
lineage4.1
|
None
|
ERR4814352
|
HR-TB
|
lineage2.2.1
|
None
|
ERR176779
|
HR-TB
|
|
None
|
ERR176793
|
Other
|
lineage4.1.1
|
None
|
SRR6325445
|
HR-TB
|
|
None
|
SRR3675465
|
HR-TB
|
|
None
|
ERR1035239
|
HR-TB
|
|
None
|
SRR3675482
|
HR-TB
|
|
None
|
ERR161033
|
HR-TB
|
|
None
|
SRR3675486
|
HR-TB
|
|
None
|
ERR161039
|
Sensitive
|
lineage4.3.4
|
None
|
ERR4814536
|
MDR-TB
|
lineage3;lineage2.1
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR181744
|
HR-TB
|
|
None
|
ERR4814683
|
Sensitive
|
lineage4.1.3;lineage4.1.2.1;lineage1.1.2
|
None
|
SRR3675221
|
HR-TB
|
|
None
|
SRR3675236
|
HR-TB
|
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR181824
|
HR-TB
|
lineage4
|
None
|