EBG00000313339 - n.1308G>C
Drug resistance types
3 Sensitive
1 RR-TB
33 HR-TB
15 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 7 |
| lineage1.2.2.2 | 1 |
| lineage3 | 2 |
| 47 | |
| lineage4.8;La3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 4 |
| lineage4.1.1 | 2 |
| lineage6.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4 | 3 |
| lineage4.3.3 | 2 |
| lineage4.9 | 4 |
| lineage2.2.1 | 8 |
| lineage2.2 | 1 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 1 |
| lineage2.1 | 2 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3804155 | Other | lineage4.1.2.1 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4407452 | Sensitive | lineage3 | None | ERR4407463 | HR-TB | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4811105 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811142 | MDR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR702406 | HR-TB | None | ERR736867 | HR-TB | None | ERR9030495 | Other | lineage1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR736874 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786569 | Other | lineage4.8 | None | ERR9786617 | Other | lineage4.1.1 | None | ERR9786671 | Other | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9786843 | Other | None | SRR1172234 | Other | None | ERR9787256 | Other | lineage6.1.3 | None | ERR990545 | Other | lineage3 | None | ERR9787197 | Other | None | SRR1169194 | Other | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173384 | Other | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175074 | MDR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196494 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR11972181 | MDR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13837424 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR18003019 | Other | lineage2.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR11081257 | Other | lineage4.8 | None | ERR11081258 | Other | lineage4.8 | None | SRR22249687 | Sensitive | lineage4.8 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR28119741 | Pre-XDR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR5341302 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4972483 | Pre-XDR-TB | lineage4.1.2.1.1 | None | ERR11466146 | Other | lineage4.3.4.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | SRR7535086 | Other | None | ERR323043 | HR-TB | None | ERR1035157 | Other | lineage4.9 | None |
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