EBG00000313339 - n.1308G>C


Drug resistance types
2 Sensitive 3 RR-TB 15 HR-TB 8 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 69 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3 5
lineage4.9 20
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.1;lineage4.8 2
lineage2.2.1;lineage6.3 1
lineage4.6.2.2 3
lineage3.1.1 1
lineage4.1.1.1 3
La3 2
lineage4.3.4.1 1
lineage4.9;lineage6.3 5
La3;lineage4.9 1
lineage2.1;lineage4.9 5
lineage3.1 1
11
lineage4.3.4.2.1 2
lineage4.8 2
lineage6.3.1 1
La3;lineage2.2.1 1
lineage2.2.1 4
lineage4.1.2.1 7
lineage2.2 2
M.canetti;lineage1 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1 2
La3;lineage2.1;lineage6.3 1
lineage4.6.1.1 1
lineage1.2.2.2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
La3;lineage2.1;lineage4.9 2
lineage4.1.2.1.1 1
lineage3 1
La3;lineage4.8 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 100
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1169194 Other lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR1165699 Other lineage4.9 None
SRR1172728 RR-TB La3 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR9786843 Other None
SRR1172857 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR9786671 Other None
ERR176549 Other lineage4.3.4.2.1 None
SRR1173363 Other None
SRR1196566 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR22249687 Sensitive lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
SRR1173355 Other lineage4.9 None
ERR9786627 Other lineage4.1.2.1 None
SRR1196677 Other lineage2.2 None
SRR15014655 Other M.canetti;lineage1 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR1173400 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR12142341 HR-TB lineage2.1 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4797285 MDR-TB lineage1.2.2.2 None
SRR29772570 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR28119741 Pre-XDR-TB lineage2.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1181020 Other lineage2.2.1 None
ERR11466146 Other lineage4.3.4.2.1 None
ERR4972483 Pre-XDR-TB lineage4.1.2.1.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786617 Other lineage4.1.1.1 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7535086 Other None
ERR990545 Other lineage3 None
ERR702406 Other lineage2.1 None
ERR12015083 Other La3;lineage4.8 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1184372 MDR-TB None
ERR9786604 Other None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR4407463 HR-TB None
ERR9786694 Other lineage4.1.2.1 None
SRR1172951 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
SRR29016780 Other lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None