Rv3244c - c.-228C>G
Drug resistance types
0 Sensitive
11 RR-TB
34 HR-TB
36 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| 12 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage1.1.2 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.2.1 | 5 |
| lineage3 | 2 |
| lineage4.9;lineage7 | 3 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 9 |
| lineage6.1.1 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage4.9 | 18 |
| lineage2.2.1.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| lineage2.1 | 3 |
| lineage4 | 2 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 4 |
| lineage2.1;lineage4.9 | 11 |
| lineage4.1;lineage4.8 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 3 |
| lineage5.2 | 2 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;lineage2 | 1 |
| lineage6.1.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.2.BCG | 1 |
| La1.7;lineage4.9 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.3 | 2 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La3 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 145 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184381 | MDR-TB | None | ERR9786604 | Other | None | SRR1184372 | MDR-TB | None | SRR6789626 | Other | None | ERR234659 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4800341 | HR-TB | lineage3 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR702406 | Other | lineage2.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1172310 | MDR-TB | lineage4.9 | None | SRR3675214 | Other | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None | SRR6046644 | MDR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046397 | RR-TB | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675248 | Other | lineage4.9 | None | SRR6046382 | RR-TB | lineage2.2.1 | None | SRR7496472 | Other | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1184294 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3283042 | HR-TB | lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR736863 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR9786843 | Other | None | ERR2514692 | Other | None | SRR18213713 | HR-TB | None | ERR987722 | MDR-TB | None | ERR4407463 | HR-TB | None | ERR9787197 | Other | None | SRR3675236 | Other | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR387051 | RR-TB | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR3675221 | Other | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR14066533 | RR-TB | lineage1.1.1 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR5341418 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1172817 | Other | La3 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None |
|---|
