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SRA data
Rv3547
- c.-223G>C
Drug resistance types
8 Sensitive
0 RR-TB
7 HR-TB
2 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
10
La1.7;lineage4.9;lineage7
2
La3;lineage2.1;lineage4.9;lineage6.3
1
La1.7;M.canetti;lineage4.9
1
lineage2.2.1
1
lineage4.3.4.1
1
lineage2.1;lineage4.9;lineage6.3
1
lineage4.8
1
La1.7;lineage3;lineage4.9;lineage7
1
lineage2.2.1;lineage4.9
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
21
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR3283021
HR-TB
lineage4.9
None
ERR349300
Sensitive
lineage4.9
None
ERR373945
Sensitive
lineage4.9
None
ERR3797047
MDR-TB
lineage4.9
None
ERR4769474
HR-TB
lineage4.9
None
ERR4799547
HR-TB
lineage2.2.1
None
ERR4811030
Sensitive
lineage4.9
None
ERR4811031
Sensitive
lineage4.5
None
ERR702404
HR-TB
lineage2.1;lineage4.9;lineage6.3
None
ERR736835
HR-TB
La1.7;M.canetti;lineage4.9
None
Showing 1 to 10 of 21 entries
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