Rv3245c - c.1479A>G


Drug resistance types
4 Sensitive 6 RR-TB 45 HR-TB 37 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 76 Other
lineage Counts
lineage Count
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage4.9;lineage6.3 9
lineage2.1;lineage4.9 11
lineage4.9 28
La1.6;La3;M.canetti;lineage4.2.2 1
M.canetti;lineage2.1;lineage4.9 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage6.3 2
lineage2.2 4
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage2.2.1 7
lineage4 3
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.6.1.1 1
La1.2;La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage4.5 4
lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 6
lineage2.2.1.2;lineage7 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
La3 1
lineage6.1.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
10
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.8 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 3
M.canetti;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage4.1.3 2
lineage3.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.3.4.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La3;lineage2 1
lineage3 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
La1.7;lineage4.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.2.BCG 1
lineage4.9;lineage6.3 2
La1.7;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La2;lineage2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1 3
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage5.2 2
lineage4.1.1.1 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 170
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR3675270 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR176549 Other lineage4.3.4.2.1 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20969731 Other lineage2.2.1 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR15368973 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR7240033 Other La1.2;La1.8.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4831137 Sensitive lineage4.5 de
ERR3283032 Other lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR1184294 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR4819781 Other lineage2.2.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR10808730 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1172817 Other La3 None
ERR9787165 Other lineage6.1.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR20970016 Other lineage2.2 None
SRR3675568 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045053 Other lineage4 None
SRR1184372 MDR-TB None
SRR18213713 HR-TB None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR3797069 Other lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR4831143 Sensitive lineage4.5 de
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR387051 RR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4799025 Other lineage4.8 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR1184346 HR-TB lineage3.1 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046382 RR-TB lineage2.2.1 None
SRR7496472 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR11068034 Sensitive lineage4.5 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR234659 HR-TB None
ERR2514692 Other None
ERR4407463 HR-TB None
SRR3675236 Other None
SRR1196583 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4800341 HR-TB lineage3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR5341330 Other lineage4.9 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR6046878 Other lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR702406 Other lineage2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045548 Other lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4831166 Sensitive lineage4.5 de
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR176793 Other lineage4.1.1.1 None
ERR4799513 HR-TB lineage2.2 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR3804155 Other lineage4.1.2.1 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR473332 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4769452 Other lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
ERR9786604 Other None
SRR6789626 Other None
ERR9787197 Other None
SRR21733183 RR-TB lineage1.1.2 None
ERR5336148 Other lineage2.1;lineage6.3 None