Rv3245c - c.978C>G


Drug resistance types
31 Sensitive 8 RR-TB 25 HR-TB 20 MDR-TB 3 Pre-XDR-TB 1 XDR-TB 130 Other
lineage Counts
lineage Count
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9 53
lineage4.9;lineage6.3 6
lineage1.1.2;lineage4.1.2.1;lineage4.1.3 1
23
lineage3 4
La3;lineage4.8 1
lineage6.3.1 1
lineage2.1 5
lineage2.2 1
lineage2.2.2 1
La3;lineage4.9 1
lineage4.7 1
lineage4.3.4.2.1 2
lineage2.1;lineage4.9;lineage6.3 10
lineage2.1;lineage4.9 14
lineage4 2
lineage4.4.1.1 1
lineage4.2.2.2 1
lineage5.2 2
lineage4.1.1.1 3
lineage4.1;lineage4.8 2
lineage4.8 5
La3 2
lineage4.1.2.1 10
lineage2.2.1 12
lineage4.1.3 2
lineage4.3.4.1 2
lineage4.8.1 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.6.2.2 3
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
lineage3.1.2.1;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3 2
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
lineage4.9;lineage7 3
La1.2.BCG;La1.8.1 1
lineage2.2.1;lineage6.3 1
lineage2.1;lineage4.3.2;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage1.2.2.2 2
lineage3.1.1 1
lineage4.2.1 2
lineage4.3.3 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage1.1.2 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 2
La3;lineage3 1
lineage4.6.1.1 1
lineage2.2.1;lineage3 1
lineage3.1 1
lineage4.3.2 1
lineage4.8;lineage4.9 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
La1.7;lineage4.2 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR6044855 Sensitive lineage4.9 None
SRR21690947 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4814683 Sensitive lineage1.1.2;lineage4.1.2.1;lineage4.1.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28119805 Other lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR4817893 Other La3;lineage4.8 None
ERR9787139 Other lineage6.3.1 None
SRR1710057 Other lineage2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR3797069 Other lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR176549 Other lineage4.3.4.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR4195436 Sensitive lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR26159043 Other lineage4.9 None
ERR2513470 Other lineage4.2.2.2 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR176793 Other lineage4.1.1.1 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1196566 Other lineage4.9 None
ERR11466174 Other lineage4.8 None
SRR1172728 RR-TB La3 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR11466499 Other lineage4.3.4.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
SRR1180137 RR-TB lineage2.2.1 None
SRR12416840 MDR-TB lineage4.9 None
SRR1172817 Other La3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9121778 Sensitive lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11043075 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR25827507 MDR-TB lineage4.1.1.1 None
ERR9786617 Other lineage4.1.1.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR2517167 Sensitive lineage4.9 nl
SRR3675572 Other None
ERR9786671 Other None
ERR9786604 Other None
ERR9786843 Other None
ERR2514692 Other None
SRR18213713 HR-TB None
SRR1172857 Other None
SRR7496517 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR4816999 Other None
ERR4195654 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR3275163 Sensitive lineage4.9 nl
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR2514390 Sensitive lineage3.1.2.1;lineage4.9 None
SRR3675549 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR18003019 Other lineage2.2.1 None
ERR11465025 Other lineage4.1.1.3 None
SRR1173355 Other lineage4.9 None
ERR4817735 Other lineage4.8 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1169194 Other lineage4.9 None
ERR702406 Other lineage2.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR3275242 Sensitive lineage4.9 nl
SRR3675214 Other lineage4.9 None
ERR3283044 Other lineage4 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4820335 Other lineage4.1.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR6045526 Other lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR21690271 Sensitive lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR502912 Other lineage2.2.1 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
ERR3275726 Sensitive lineage4.9 nl
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR21690776 Sensitive lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR2517424 Sensitive lineage4.9 nl
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR1196474 Other lineage3.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6785268 Sensitive lineage4.2.1 None
ERR3797070 Other lineage4.9 None
ERR3275264 Sensitive lineage4.9 nl
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1172951 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR2446570 Sensitive lineage4.8 nl
ERR4814352 Other lineage2.2.1 None
SRR13583478 HR-TB lineage4.3.4.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6785267 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675457 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR1172234 Other lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR1196546 Other lineage4.9 None
SRR2100702 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR9121137 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR9787165 Other lineage6.1.3 None
SRR3675311 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR11466146 Other lineage4.3.4.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4818615 Sensitive None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR6789626 Other None
ERR234659 HR-TB None
SRR7535086 Other None
SRR25827682 Other None
ERR4407463 HR-TB None
SRR1196768 MDR-TB None
ERR4817060 Other None
ERR2446191 Sensitive lineage4.9 nl
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR11082447 Sensitive lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6785262 Sensitive lineage4.2.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3275201 Sensitive lineage4.8 nl
ERR4817896 HR-TB lineage2.2.1 None
ERR9896144 Other lineage3 None
ERR4195639 Sensitive lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
ERR2517598 Sensitive lineage4.9 nl
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR9786627 Other lineage4.1.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR15368973 Other lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR1184346 HR-TB lineage3.1 None
ERR9117805 Other lineage4.3.2 None
ERR230077 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175049 Other lineage4.8;lineage4.9 None
SRR6785527 Sensitive lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR2446158 Sensitive lineage4.9 nl
ERR4818347 Other lineage4.1.2 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR9121416 Sensitive lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None